BLASTX nr result

ID: Coptis21_contig00031237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031237
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...    69   3e-10
emb|CBI22382.3| unnamed protein product [Vitis vinifera]               69   3e-10
gb|AFW64064.1| hypothetical protein ZEAMMB73_911522 [Zea mays]         68   9e-10
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...    68   9e-10
gb|AFW64061.1| hypothetical protein ZEAMMB73_080311 [Zea mays]         67   2e-09

>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1271

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 61/160 (38%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
 Frame = +3

Query: 39  LDSLNCMFCGAPKMW*GVPMEDAQKLEAAMKQHLSDLFRCLTRL*HSSHSTLT------- 197
           L SLN M  GAPK+W GVP +DA KLEAAM++ L DLF     L H   + L+       
Sbjct: 412 LYSLNYMHWGAPKIWYGVPGQDALKLEAAMRKRLPDLFEEQPDLLHKLVTQLSPSIVKFE 471

Query: 198 -LKVYLSI-----ILLRVPWNLLSRSLIGCNCGSS*LVAL--WAAYCGALS*AV------ 335
            + VY  +      +L  P    S    G NC  +  VA   W  + G  +  +      
Sbjct: 472 GVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPH-GQNAIELYREQGR 530

Query: 336 P*TVSSDKILFGAAR---K**GQLELLRKNTVDNLRWKEV 446
             ++S DK+L GAAR   +   +L LL+KNT+DNLRWK+V
Sbjct: 531 KTSISHDKLLLGAAREAVRANWELNLLKKNTLDNLRWKQV 570


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 61/160 (38%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
 Frame = +3

Query: 39  LDSLNCMFCGAPKMW*GVPMEDAQKLEAAMKQHLSDLFRCLTRL*HSSHSTLT------- 197
           L SLN M  GAPK+W GVP +DA KLEAAM++ L DLF     L H   + L+       
Sbjct: 373 LYSLNYMHWGAPKIWYGVPGQDALKLEAAMRKRLPDLFEEQPDLLHKLVTQLSPSIVKFE 432

Query: 198 -LKVYLSI-----ILLRVPWNLLSRSLIGCNCGSS*LVAL--WAAYCGALS*AV------ 335
            + VY  +      +L  P    S    G NC  +  VA   W  + G  +  +      
Sbjct: 433 GVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPH-GQNAIELYREQGR 491

Query: 336 P*TVSSDKILFGAAR---K**GQLELLRKNTVDNLRWKEV 446
             ++S DK+L GAAR   +   +L LL+KNT+DNLRWK+V
Sbjct: 492 KTSISHDKLLLGAAREAVRANWELNLLKKNTLDNLRWKQV 531


>gb|AFW64064.1| hypothetical protein ZEAMMB73_911522 [Zea mays]
          Length = 785

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 64/159 (40%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
 Frame = +3

Query: 39  LDSLNCMFCGAPKMW*GVPMEDAQKLEAAMKQHLSDLFRCLTRL*H---SSHSTLTLK-- 203
           L SLN M  GAPKMW GVP +DA  LEAAM++HL DLF     L H   +  ST  LK  
Sbjct: 434 LYSLNYMHWGAPKMWYGVPGKDAVNLEAAMRKHLPDLFEEQPDLLHNLVTQFSTSLLKSE 493

Query: 204 ---VYLSI-----ILLRVPWNLLSRSLIGCNCGSS*LVAL--WA-----AYCGALS*AVP 338
              VY  +      +L  P    +    G NC  +  VA   W      A       A  
Sbjct: 494 GVPVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVAPIDWLPIGQDAVELYRKQARK 553

Query: 339 *TVSSDKILFGAAR---K**GQLELLRKNTVDNLRWKEV 446
            TVS DK+L GAAR   +    +  L+KNT DNLRWK +
Sbjct: 554 ITVSHDKLLLGAAREAIRAHWDILFLKKNTADNLRWKSM 592


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 60/162 (37%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
 Frame = +3

Query: 39  LDSLNCMFCGAPKMW*GVPMEDAQKLEAAMKQHLSDLFRCLTRL*HSSHSTLT------- 197
           L SLN M  GA KMW GVP +DA KLE  M++HL DLF     L H   + L+       
Sbjct: 285 LYSLNYMHWGAQKMWYGVPGKDAIKLEETMRKHLPDLFEEQPDLLHKLVTQLSPNILRSE 344

Query: 198 -LKVYLSI-----ILLRVPWNLLSRSLIGCNCGSS*LVAL--W--------AAYCGALS* 329
            + VY  +      +L  P    S    G NC  +  VA   W          YC     
Sbjct: 345 GVPVYRCVQNSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQTAIELYCEQRRR 404

Query: 330 AVP*TVSSDKILFGAAR---K**GQLELLRKNTVDNLRWKEV 446
               ++S DK+L GAAR   +   +L LL++NT+DNLRWK+V
Sbjct: 405 T---SISHDKLLLGAAREAVRAHWELNLLKRNTLDNLRWKDV 443


>gb|AFW64061.1| hypothetical protein ZEAMMB73_080311 [Zea mays]
          Length = 1232

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 63/159 (39%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
 Frame = +3

Query: 39  LDSLNCMFCGAPKMW*GVPMEDAQKLEAAMKQHLSDLFRCLTRL*H---SSHSTLTLK-- 203
           L SLN M  GAPKMW GVP +DA  LEAAM++HL DLF     L H   +  ST  LK  
Sbjct: 409 LYSLNYMHWGAPKMWYGVPGKDAVNLEAAMRKHLPDLFEEQPDLLHNLVTQFSTSLLKSE 468

Query: 204 ---VYLSI-----ILLRVPWNLLSRSLIGCNCGSS*LVAL--WA-----AYCGALS*AVP 338
              VY  +      +L  P    +    G NC  +  VA   W      A       A  
Sbjct: 469 GVPVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVAPIDWLPIGQDAVELYRKQARK 528

Query: 339 *TVSSDKILFGAAR---K**GQLELLRKNTVDNLRWKEV 446
            TVS DK+L GAAR   +    +  L++NT DNLRWK +
Sbjct: 529 ITVSHDKLLLGAAREAIRAHWDILFLKRNTADNLRWKSM 567


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