BLASTX nr result

ID: Coptis21_contig00031235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031235
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...    94   2e-17
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_003548234.1| PREDICTED: transcription factor bHLH126-like...    83   2e-14
ref|NP_001242511.1| uncharacterized protein LOC100775836 [Glycin...    80   1e-13

>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
 Frame = -2

Query: 365 LLPLHHSDELLFQIPLISYQQEHPIQQEVLLIDPS-DCTNPSVKVDKIQRKHRCKSFETS 189
           + PLH  +ELLF+IP    +Q + IQQ+++L   S + +N S    K   +   K F   
Sbjct: 1   MFPLHQGNELLFRIPYTPSKQ-YIIQQDMILDHASLEASNLSNHKGKSPNR---KLFAQD 56

Query: 188 NNRGEGGEEDNKKMKTTHREVERHRRQQMANLYGSLRSLVPREYLKGKRSISDQINGATH 9
           NN     +   KK K  HR+VER RRQ MA LY SLRSL+P EY+KGKR+IS+ +NGA +
Sbjct: 57  NNDEISNDGKKKKKKIVHRDVERQRRQDMATLYTSLRSLLPLEYIKGKRAISEHMNGAVN 116

Query: 8   YV 3
           Y+
Sbjct: 117 YI 118


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/121 (36%), Positives = 68/121 (56%)
 Frame = -2

Query: 365 LLPLHHSDELLFQIPLISYQQEHPIQQEVLLIDPSDCTNPSVKVDKIQRKHRCKSFETSN 186
           + PLH   EL F+I    +QQ++ I   +L    ++    +   + +++  R       N
Sbjct: 1   MFPLHQGGELCFKISSSPHQQDN-IPDLILAHQYAEIHGSTDITNNMEKGRRRNIISMDN 59

Query: 185 NRGEGGEEDNKKMKTTHREVERHRRQQMANLYGSLRSLVPREYLKGKRSISDQINGATHY 6
           N       +N K K  HR++ER RRQ+M  LY SLR+L+P E++KGKRSISD +N A +Y
Sbjct: 60  NEAARDNNNNSKKKMMHRDIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVNY 119

Query: 5   V 3
           +
Sbjct: 120 I 120


>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
 Frame = -2

Query: 365 LLPLHHSDELLFQIPLISYQQEHPIQQEVLL-----IDPSDCTNPSVKVDKIQRKHRCKS 201
           + PLH  DEL F I    +QQ H I Q+++L     +  SD TN   K++  +R+     
Sbjct: 1   MFPLHQGDELCFNISSDPHQQ-HNIPQDLILARYAALQGSDTTN---KMENDRRRFLISM 56

Query: 200 FETSNNRGEGGEEDNKKMKTTHREVERHRRQQMANLYGSLRSLVPREYLKGKRSISDQIN 21
                   +  + +NKKM   HR +ER RRQ+M  LY SLR+L+P E++KGKRSISD +N
Sbjct: 57  DSNHEVARDHSKNNNKKMM--HRNIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMN 114

Query: 20  GATHYV 3
            + +Y+
Sbjct: 115 ESVNYI 120


>ref|XP_003548234.1| PREDICTED: transcription factor bHLH126-like [Glycine max]
          Length = 246

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 LLPLHHSDELLFQIPLISYQQEHPIQQEVLLIDPSDCT-NPSVK--VDKIQRKHRCKSFE 195
           +LPL   +EL+ Q     + Q+H I ++++L D +    N S +  +     +   K F 
Sbjct: 1   MLPLQRGNELVIQFSNSPHHQQHKISEDLILDDYASLNVNDSNQKFITSSSSQPTKKLFY 60

Query: 194 TSNNRGEGGEEDNKKMKTTHREVERHRRQQMANLYGSLRSLVPREYLKGKRSISDQINGA 15
            +N +     E  KKM   H E+ER RRQ+MA  Y SLRSL+P E++KGKRSISD +N A
Sbjct: 61  GANKKNHDSNEHKKKM--IHMEIERKRRQEMATFYASLRSLLPLEFIKGKRSISDHMNEA 118

Query: 14  THYV 3
            +Y+
Sbjct: 119 ANYI 122


>ref|NP_001242511.1| uncharacterized protein LOC100775836 [Glycine max]
           gi|255641055|gb|ACU20807.1| unknown [Glycine max]
          Length = 247

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -2

Query: 365 LLPLHHSDELLFQIPLISYQQEHPIQQEVLLIDPSDCTNPSVKV-DKIQRKHRCKSF--- 198
           + PL   +EL+ Q     +  +H I Q+++L D     +P V   DK  R  R K     
Sbjct: 1   MFPLQRGNELVIQFSN-GHHPQHKISQDLILDDQDIDQSPLVGYSDKKLRTSRPKKLFYH 59

Query: 197 ETSNNRGEGGEEDNKKMKTTHREVERHRRQQMANLYGSLRSLVPREYLKGKRSISDQING 18
           E         +E  KKM   HRE+E+ RRQ+MA L+ SLRSL+P +++KGKRSISDQ+N 
Sbjct: 60  EADTCHANSNQEYTKKM--VHREIEKQRRQEMATLHASLRSLLPLDFIKGKRSISDQMNE 117

Query: 17  ATHYV 3
           A  Y+
Sbjct: 118 AVSYI 122


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