BLASTX nr result

ID: Coptis21_contig00031212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031212
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ...    74   9e-12
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    71   1e-10
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...    71   1e-10
ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group] g...    71   1e-10
gb|EEE50671.1| hypothetical protein OsJ_30917 [Oryza sativa Japo...    71   1e-10

>ref|XP_003614469.1| Helicase-like protein [Medicago truncatula]
           gi|355515804|gb|AES97427.1| Helicase-like protein
           [Medicago truncatula]
          Length = 377

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/93 (40%), Positives = 52/93 (55%)
 Frame = +2

Query: 107 TCRSSHNCARDFVYTPNFQQFEITHIHTCEFCHAELFPSESRVFCCLRGKVKLPLLPTPP 286
           T ++ HN AR+F  T       +    TC  C+ +LF  E++  CC  G V +  +  P 
Sbjct: 100 TFQAIHNNARNFKNTVMMINALLPTPRTCRRCNTKLFYKETQYMCCKNGNVIVTQVAAPE 159

Query: 287 DLMYLYAAHTDEAVHFRQNIRSYNHVFSFTSMG 385
           +L  L++  T E  HFRQNIR YNHV SFTS+G
Sbjct: 160 ELQQLFSDTTIEGRHFRQNIRGYNHVMSFTSLG 192


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/65 (49%), Positives = 44/65 (67%)
 Frame = +2

Query: 191 CEFCHAELFPSESRVFCCLRGKVKLPLLPTPPDLMYLYAAHTDEAVHFRQNIRSYNHVFS 370
           C+ C A+ F  E+  FCC  GK+KL  L TPP+LM L+++   +A HFR NIR +N  FS
Sbjct: 80  CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 139

Query: 371 FTSMG 385
           FT++G
Sbjct: 140 FTTLG 144


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
           gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
           Japonica Group]
          Length = 1575

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/65 (49%), Positives = 44/65 (67%)
 Frame = +2

Query: 191 CEFCHAELFPSESRVFCCLRGKVKLPLLPTPPDLMYLYAAHTDEAVHFRQNIRSYNHVFS 370
           C+ C A+ F  E+  FCC  GK+KL  L TPP+LM L+++   +A HFR NIR +N  FS
Sbjct: 239 CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 298

Query: 371 FTSMG 385
           FT++G
Sbjct: 299 FTTLG 303


>ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group]
           gi|255670879|dbj|BAF08718.2| Os02g0463700 [Oryza sativa
           Japonica Group]
          Length = 1221

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/67 (46%), Positives = 44/67 (65%)
 Frame = +2

Query: 182 IHTCEFCHAELFPSESRVFCCLRGKVKLPLLPTPPDLMYLYAAHTDEAVHFRQNIRSYNH 361
           +  CEFC A+ F  E + FCC  G+++L    TPP+LM L+ ++  +A HFR NIR +N 
Sbjct: 252 VKNCEFCDAKKFEHEPKGFCCRSGQIRLANQDTPPELMRLWTSNDSDAQHFRNNIRFFNG 311

Query: 362 VFSFTSM 382
            FSFTS+
Sbjct: 312 HFSFTSL 318


>gb|EEE50671.1| hypothetical protein OsJ_30917 [Oryza sativa Japonica Group]
          Length = 767

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/65 (49%), Positives = 44/65 (67%)
 Frame = +2

Query: 191 CEFCHAELFPSESRVFCCLRGKVKLPLLPTPPDLMYLYAAHTDEAVHFRQNIRSYNHVFS 370
           C+ C A+ F  E+  FCC  GK+KL  L TPP+LM L+++   +A HFR NIR +N  FS
Sbjct: 179 CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 238

Query: 371 FTSMG 385
           FT++G
Sbjct: 239 FTTLG 243


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