BLASTX nr result

ID: Coptis21_contig00031195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031195
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002539361.1| conserved hypothetical protein [Ricinus comm...    53   2e-11
gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indi...    64   1e-08
ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago ...    55   6e-06

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/63 (92%), Positives = 58/63 (92%)
 Frame = +2

Query: 131 QAVDSFIREGKKGPKHGRCRTLECQRKARPYLFFQACSDIRFPRKIKLVSRVMGNLLARF 310
           QAVDSFIREGKKGPKH RCRTLE QRKA  YLFFQACSDIRFPRKIKLVSRVMGNL ARF
Sbjct: 121 QAVDSFIREGKKGPKHLRCRTLEWQRKAGSYLFFQACSDIRFPRKIKLVSRVMGNLPARF 180

Query: 311 GEH 319
           GEH
Sbjct: 181 GEH 183


>ref|XP_002539361.1| conserved hypothetical protein [Ricinus communis]
           gi|223506854|gb|EEF23023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +1

Query: 184 MPYT*VPKESETVPVFPGLFGHTVPAEDQVGEPCDGKPSRT 306
           MPYT   +++ +  +F    GHTVPAEDQVGEPCDGKPSRT
Sbjct: 1   MPYTEWQRKAGSY-LFSRPVGHTVPAEDQVGEPCDGKPSRT 40



 Score = 40.8 bits (94), Expect(2) = 2e-11
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +3

Query: 363 GSSLNSQIGPTRNSLLTPC 419
           GSSL+SQIGPTRNSLLTPC
Sbjct: 41  GSSLDSQIGPTRNSLLTPC 59


>gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indica Group]
          Length = 313

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = -2

Query: 103 R*FTTEANKRLDQEKGVLRALCPTHLTSSRGSPV 2
           R  TTEA KRLDQEKGVLRALCPTHLTSSRGSPV
Sbjct: 263 RFLTTEAKKRLDQEKGVLRALCPTHLTSSRGSPV 296


>ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago truncatula]
           gi|355477344|gb|AES58547.1| hypothetical protein
           MTR_1g005540 [Medicago truncatula]
          Length = 90

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -3

Query: 102 GDSLPKRIKGWIKKRGYYEPSAPRI 28
           GDSLPKR KGWIKKRGYYEPSAPRI
Sbjct: 9   GDSLPKRRKGWIKKRGYYEPSAPRI 33


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