BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031194
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   190   1e-46
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac...    85   7e-15
ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp....    85   7e-15
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr...    84   9e-15
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ...    84   2e-14

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  190 bits (482), Expect = 1e-46
 Identities = 94/124 (75%), Positives = 95/124 (76%)
 Frame = +2

Query: 59  AAVAPRRYGLDPLLPTPGHHSMSGIRGDILDVTTPWGLCRPAFRSIHS*GGRSRTLQVWE 238
           AAVAPRRYGLDPLLP PG+HSMSGIRGDILDV                          WE
Sbjct: 12  AAVAPRRYGLDPLLPIPGYHSMSGIRGDILDV--------------------------WE 45

Query: 239 RSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSTPLYRLNHSKGLVGGTG 418
           RSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSS PLYRLNHS GLVGGTG
Sbjct: 46  RSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSNGLVGGTG 105

Query: 419 EPRE 430
           EPRE
Sbjct: 106 EPRE 109


>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
           gi|56806586|dbj|BAD83487.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 276 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 163
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 38



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -2

Query: 191 IERQGGT---APREWLRPVCPLLFPTCYGAPGWVGAGRVRIAVEQQQQTEVGSQINKSKI 21
           I+R+ G     PREWLRPVCP LFPTCYG P WVGAGRVRIA EQQ + ++   +  S  
Sbjct: 28  IDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEWVGAGRVRIAAEQQPRPDLIYLLGNSSG 87

Query: 20  EYLLCR 3
           ++ + +
Sbjct: 88  DFTVAK 93


>ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp. mays]
           gi|40795119|gb|AAR91163.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 105

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/77 (62%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = -1

Query: 276 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPLIPDMLWCPGV 103
           M+GAVLA P QDRS TC VRDRPPQLCIDRKAGR SPQ  GVVTSSMSPL       P  
Sbjct: 1   MQGAVLALPSQDRSRTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSPLDSRHAMIPHP 60

Query: 102 GRSGSSPYRRGATAANR 52
           G  G+   R  A    R
Sbjct: 61  GWVGAGRVRITAEQLQR 77


>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549503|gb|AEK53324.1| hypothetical protein
           (mitochondrion) [Boea hygrometrica]
          Length = 103

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/69 (63%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
 Frame = -1

Query: 276 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPLIPDMLWCP-- 109
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDR+ GRHSPQ    +     PL P     P  
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60

Query: 108 -GVGRSGSS 85
            G GR+ S+
Sbjct: 61  VGAGRARSA 69



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
 Frame = -2

Query: 191 IERQGGT---APREWLRPVCPLLFPTCYGAPGWVGAGRVRIAVEQQQQTEVGSQINKSKI 21
           I+R+GG      RE LRPVCP LFPTCYGAPGWVGAGR R A EQQ + ++   +  S  
Sbjct: 28  IDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGWVGAGRARSAAEQQPRPDLIYLLGNSSS 87

Query: 20  EYLLCR 3
           ++ + +
Sbjct: 88  DFTVAK 93


>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
           vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
           vinifera]
          Length = 103

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/59 (71%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
 Frame = -1

Query: 276 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPLIPDMLWCPG 106
           MRGAVLA PDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ    +     PL P     PG
Sbjct: 1   MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPG 59



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
 Frame = -2

Query: 191 IERQGGT---APREWLRPVCPLLFPTCYGAPGWVGAGRVRIAVEQQQQTEVGSQINKSKI 21
           I+R+ G     PREWLRPVCP LFPTCYGAPGW+GAGRVRIA EQQ + ++   +  S  
Sbjct: 28  IDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGWIGAGRVRIAAEQQPRPDLIYLLGNSSG 87

Query: 20  EYLLCR 3
           ++ + +
Sbjct: 88  DFTVAK 93