BLASTX nr result

ID: Coptis21_contig00031191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031191
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    56   3e-06
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    56   3e-06

>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = +3

Query: 6    TGKAAAGAVCRDAEGLILGAAFRRFQ-AQEVDQAEAIGAEVXXXXXXXXXXSSVIFEGDS 182
            TG+A+AG V RD  GLIL AA +        +QAEA+ +              VI E D+
Sbjct: 932  TGEASAGIVIRDCRGLILLAACKTLHPCSSAEQAEALASLEGIRCALQWIHMPVILETDN 991

Query: 183  SSVISSLQPCNMSVS-WSISSIVCFVKTLVATLQEVEFAWVSRERNGLAHDLATWAL 350
            + V++ L+  + S S W    ++   K  +  LQ VE A + R+ N +AH LA  AL
Sbjct: 992  AEVVARLKTKHSSRSVW--EGVIMEAKAAMQGLQAVEVAHIKRDSNKVAHTLAQMAL 1046


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = +3

Query: 6    TGKAAAGAVCRDAEGLILGAAFRRFQ-AQEVDQAEAIGAEVXXXXXXXXXXSSVIFEGDS 182
            TG+A+AG V RD  GLIL AA +        +QAEA+ +              VI E D+
Sbjct: 1126 TGEASAGIVIRDCRGLILLAACKTLHPCSSAEQAEALASLEGIRCALQWIHMPVILETDN 1185

Query: 183  SSVISSLQPCNMSVS-WSISSIVCFVKTLVATLQEVEFAWVSRERNGLAHDLATWAL 350
            + V++ L+  + S S W    ++   K  +  LQ VE A + R+ N +AH LA  AL
Sbjct: 1186 AEVVARLKTKHSSRSVW--EGVIMEAKAAMQGLQAVEVAHIKRDSNKVAHTLAQMAL 1240


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