BLASTX nr result

ID: Coptis21_contig00031184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031184
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24120.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   222   3e-56
ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici...   218   4e-55
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   217   7e-55
ref|XP_002891884.1| abc transporter family protein [Arabidopsis ...   213   2e-53

>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/117 (92%), Positives = 112/117 (95%)
 Frame = -2

Query: 352 TLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLAL 173
           TL TTGISVGF+FLGRDFYNALANKDQEQF+KQLLYYLGAFAGGIPFFVLRDYARE LAL
Sbjct: 100 TLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGAFAGGIPFFVLRDYAREILAL 159

Query: 172 RWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 2
           RWRSWMTSYY+ERYLKN TFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL FFNA
Sbjct: 160 RWRSWMTSYYMERYLKNWTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLAFFNA 216


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/117 (92%), Positives = 112/117 (95%)
 Frame = -2

Query: 352 TLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLAL 173
           TL TTGISVGF+FLGRDFYNALANKDQEQF+KQLLYYLGAFAGGIPFFVLRDYARE LAL
Sbjct: 100 TLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGAFAGGIPFFVLRDYAREILAL 159

Query: 172 RWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 2
           RWRSWMTSYY+ERYLKN TFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSL FFNA
Sbjct: 160 RWRSWMTSYYMERYLKNWTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLAFFNA 216


>ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis]
           gi|223546467|gb|EEF47966.1| peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 742

 Score =  218 bits (555), Expect = 4e-55
 Identities = 104/117 (88%), Positives = 111/117 (94%)
 Frame = -2

Query: 352 TLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLAL 173
           TLATTGISVGF+FLGRDFYNALANKDQ+QF+KQLLYYLG FAGGIPFFVLRDYARE L+L
Sbjct: 125 TLATTGISVGFNFLGRDFYNALANKDQDQFTKQLLYYLGGFAGGIPFFVLRDYAREILSL 184

Query: 172 RWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 2
           RWRSWMT YY+ERYLKNQ FY IQSQS++DNPDQRIVDDLSSFTGTALSFSLT FNA
Sbjct: 185 RWRSWMTKYYMERYLKNQAFYKIQSQSIVDNPDQRIVDDLSSFTGTALSFSLTLFNA 241


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
           trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
           membrane ABC transporter family, PMP family [Populus
           trichocarpa]
          Length = 651

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/117 (89%), Positives = 110/117 (94%)
 Frame = -2

Query: 352 TLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLAL 173
           TL TTGISVGF+FLGRDFYNALANKDQEQF+KQLLYYLGAFAGGIP FVLRDYARE L L
Sbjct: 39  TLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGAFAGGIPLFVLRDYAREILGL 98

Query: 172 RWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 2
           RWRSWMT +Y+ERYLKNQTFY IQSQS+IDNPDQRIVDDLSSFTGTALSFSLT FNA
Sbjct: 99  RWRSWMTKFYMERYLKNQTFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLTLFNA 155


>ref|XP_002891884.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337726|gb|EFH68143.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 722

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/117 (87%), Positives = 110/117 (94%)
 Frame = -2

Query: 352 TLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLAL 173
           TLATTGISVGF+FLGRDFYN+LANKDQEQF+KQL YYL AFAGGIPFFVLRDY +ETL+L
Sbjct: 106 TLATTGISVGFNFLGRDFYNSLANKDQEQFTKQLFYYLCAFAGGIPFFVLRDYTKETLSL 165

Query: 172 RWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTFFNA 2
           RWRSWMT YY++RYLK+QTFY IQSQSMIDNPDQRIVDDLSSFTGTALSFSLT  NA
Sbjct: 166 RWRSWMTKYYLQRYLKDQTFYKIQSQSMIDNPDQRIVDDLSSFTGTALSFSLTLVNA 222


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