BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031182
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1...    97   2e-18
ref|XP_002881217.1| pentatricopeptide repeat-containing protein ...    97   2e-18
ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana] ...    97   2e-18
gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]             97   2e-18
gb|AAM13880.1| unknown protein [Arabidopsis thaliana]                  97   2e-18

>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
           A. Thaliana With Mn gi|406855805|pdb|4G26|A Chain A,
           Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1)
           From A. Thaliana With Ca
          Length = 501

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 54/65 (83%)
 Frame = -2

Query: 197 EWKVVKSEMDENGVCGCCRETLVCVDIDPLETENFAKELSCLAWQKEVQANFNSFEDWVR 18
           +W V ++EMDENGVC CC+E LVC+DI+P+ETE FA  L+ LA ++EV+ANFN F++W+ 
Sbjct: 259 KWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLE 318

Query: 17  RNGPF 3
           R+GPF
Sbjct: 319 RHGPF 323


>ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327056|gb|EFH57476.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 572

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 54/65 (83%)
 Frame = -2

Query: 197 EWKVVKSEMDENGVCGCCRETLVCVDIDPLETENFAKELSCLAWQKEVQANFNSFEDWVR 18
           +W V ++EMDENGVC CC+E LVC+DI+P+ETE FA  L+ LA ++EV+ANFN F++W+ 
Sbjct: 330 KWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLE 389

Query: 17  RNGPF 3
           R+GPF
Sbjct: 390 RHGPF 394


>ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
           gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName:
           Full=Proteinaceous RNase P 1,
           chloroplastic/mitochondrial; AltName:
           Full=Pentatricopeptide repeat-containing protein
           At2g32230; Flags: Precursor gi|51536606|gb|AAU05541.1|
           At2g32230 [Arabidopsis thaliana]
           gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1
           [Arabidopsis thaliana]
          Length = 572

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 54/65 (83%)
 Frame = -2

Query: 197 EWKVVKSEMDENGVCGCCRETLVCVDIDPLETENFAKELSCLAWQKEVQANFNSFEDWVR 18
           +W V ++EMDENGVC CC+E LVC+DI+P+ETE FA  L+ LA ++EV+ANFN F++W+ 
Sbjct: 330 KWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLE 389

Query: 17  RNGPF 3
           R+GPF
Sbjct: 390 RHGPF 394


>gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
          Length = 416

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 54/65 (83%)
 Frame = -2

Query: 197 EWKVVKSEMDENGVCGCCRETLVCVDIDPLETENFAKELSCLAWQKEVQANFNSFEDWVR 18
           +W V ++EMDENGVC CC+E LVC+DI+P+ETE FA  L+ LA ++EV+ANFN F++W+ 
Sbjct: 300 KWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLE 359

Query: 17  RNGPF 3
           R+GPF
Sbjct: 360 RHGPF 364


>gb|AAM13880.1| unknown protein [Arabidopsis thaliana]
          Length = 572

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 54/65 (83%)
 Frame = -2

Query: 197 EWKVVKSEMDENGVCGCCRETLVCVDIDPLETENFAKELSCLAWQKEVQANFNSFEDWVR 18
           +W V ++EMDENGVC CC+E LVC+DI+P+ETE FA  L+ LA ++EV+ANFN F++W+ 
Sbjct: 330 KWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLE 389

Query: 17  RNGPF 3
           R+GPF
Sbjct: 390 RHGPF 394