BLASTX nr result

ID: Coptis21_contig00031157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031157
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]    50   3e-07
emb|CAN79808.1| hypothetical protein VITISV_014911 [Vitis vinifera]    49   2e-06
emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]    49   2e-06
emb|CAN62375.1| hypothetical protein VITISV_028920 [Vitis vinifera]    50   3e-06
emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]    48   4e-06

>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = -2

Query: 213  GKTKMVDKLNRRGMNLQNLCLLCKGLEESIDHLLVNCTLVNDV*RIFFFSFHRPW 49
            GK    ++L RRG +L N C LC   EE++DHLL++C    D+  + F  F   W
Sbjct: 1494 GKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLFGISW 1548



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 284  FQQKRIWRKSIPFKVAFFCLLAYLGRL 204
            F  +RIWR  +P KVAFF   A  G++
Sbjct: 1470 FPSERIWRTRVPPKVAFFAWEASWGKV 1496


>emb|CAN79808.1| hypothetical protein VITISV_014911 [Vitis vinifera]
          Length = 869

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = -2

Query: 213 GKTKMVDKLNRRGMNLQNLCLLCKGLEESIDHLLVNCTLVNDV*RIFFFSFHRPW 49
           G+   +D+L +RG  L N C LC   EE+++HLL++CT+   + RI    F   W
Sbjct: 540 GRVLTLDRLQKRGWQLPNCCFLCGSDEENVNHLLIHCTVARVLWRIVLSLFGAQW 594



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 284 FQQKRIWRKSIPFKVAFFCLLAYLGRL 204
           F +K IW +++P K+AFF   A  GR+
Sbjct: 516 FPKKGIWVENVPSKLAFFAWEATWGRV 542


>emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]
          Length = 2193

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 24/58 (41%), Positives = 32/58 (55%)
 Frame = -2

Query: 213  GKTKMVDKLNRRGMNLQNLCLLCKGLEESIDHLLVNCTLVNDV*RIFFFSFHRPWDPP 40
            GK   +D L RRG  L N C LC+  EES++H+L+ CT+V  +  I F      W  P
Sbjct: 1649 GKVLTLDSLQRRGFQLPNRCFLCECEEESVNHILIYCTVVRALWDIVFGLVDVKWXFP 1706



 Score = 27.3 bits (59), Expect(2) = 2e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 293  IINFQQKRIWRKSIPFKVAFFCLLAYLGRL 204
            ++ F  K IW   +P KVAFF   A  G++
Sbjct: 1622 VMGFPYKSIWVARVPTKVAFFAWEASWGKV 1651


>emb|CAN62375.1| hypothetical protein VITISV_028920 [Vitis vinifera]
          Length = 843

 Score = 49.7 bits (117), Expect(2) = 3e-06
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -2

Query: 213 GKTKMVDKLNRRGMNLQNLCLLCKGLEESIDHLLVNCTLV 94
           GK   +D+L RRG  L N C LC   EES+DHLL++C +V
Sbjct: 439 GKVLTLDRLQRRGWQLPNCCFLCGSEEESVDHLLIHCIVV 478



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 284 FQQKRIWRKSIPFKVAFFCLLAYLGRL 204
           F +  IW +S+P K+AFF   A  G++
Sbjct: 415 FPKNSIWVESVPTKLAFFAWEATWGKV 441


>emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]
          Length = 1894

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = -2

Query: 213  GKTKMVDKLNRRGMNLQNLCLLCKGLEESIDHLLVNCTLVNDV*RIFFFSFHRPW 49
            GK   +DKL RRG  L N C LC   EE+ +H+L++CT+V  +  I    F   W
Sbjct: 1799 GKILTLDKLQRRGXQLPNRCYLCGCEEENANHILLHCTVVKTIWEITLVIFXVQW 1853



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 284  FQQKRIWRKSIPFKVAFFCLLAYLGRL 204
            F  +RIW   +P KV+FF   A  G++
Sbjct: 1775 FPNRRIWMDRVPTKVSFFAWEAAWGKI 1801


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