BLASTX nr result

ID: Coptis21_contig00031146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031146
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512644.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002304653.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_004165553.1| PREDICTED: protein TIFY 9-like [Cucumis sati...    74   2e-11
ref|XP_004140649.1| PREDICTED: protein TIFY 9-like [Cucumis sati...    74   2e-11
ref|XP_002297866.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>ref|XP_002512644.1| conserved hypothetical protein [Ricinus communis]
           gi|223548605|gb|EEF50096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 53/128 (41%), Positives = 64/128 (50%), Gaps = 36/128 (28%)
 Frame = -1

Query: 276 DIQSSISKISPEILKTMXXXXXXXXXXXXXXXXXI------------------------- 172
           DIQS+ISKI+PE+L+++                                           
Sbjct: 34  DIQSAISKINPELLRSVIVSGSANQKNAENGNQFDSKMFPALPVFSPLPRPTLETPPQTA 93

Query: 171 ----FYNGTVSVFNMPHDKAENILKLAEDGNLKFTE-----HKL--LDKDLPFARKKSLQ 25
               FYNG V+VF++P DKAE ILKLAE+G  K  E     H L  LD DLP AR+KSLQ
Sbjct: 94  PLTIFYNGAVAVFDVPRDKAETILKLAENGVSKSAESTSQKHLLDNLDGDLPIARRKSLQ 153

Query: 24  RFLEKRKE 1
           RFLEKRKE
Sbjct: 154 RFLEKRKE 161


>ref|XP_002304653.1| predicted protein [Populus trichocarpa] gi|222842085|gb|EEE79632.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 14/71 (19%)
 Frame = -1

Query: 171 FYNGTVSVFNMPHDKAENILKLAEDGNLKF---------TEH-----KLLDKDLPFARKK 34
           FYNGTV+VF++P DKAENILKLAE G  K          T+H     + LD DLP AR+K
Sbjct: 113 FYNGTVAVFDVPRDKAENILKLAEKGFSKTVVESVADPRTDHQQKLLESLDGDLPIARRK 172

Query: 33  SLQRFLEKRKE 1
           SLQRFLEKRKE
Sbjct: 173 SLQRFLEKRKE 183


>ref|XP_004165553.1| PREDICTED: protein TIFY 9-like [Cucumis sativus]
          Length = 184

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 13/70 (18%)
 Frame = -1

Query: 171 FYNGTVSVFNMPHDKAENILKLAEDGN--------LKFTEHK-----LLDKDLPFARKKS 31
           FYNGTV+VF++P DKAENILKL  +G         +  T+H+      LD DLP ARKKS
Sbjct: 99  FYNGTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTDHQQHLLASLDGDLPIARKKS 158

Query: 30  LQRFLEKRKE 1
           LQRFLEKRKE
Sbjct: 159 LQRFLEKRKE 168


>ref|XP_004140649.1| PREDICTED: protein TIFY 9-like [Cucumis sativus]
          Length = 169

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 13/70 (18%)
 Frame = -1

Query: 171 FYNGTVSVFNMPHDKAENILKLAEDGN--------LKFTEHK-----LLDKDLPFARKKS 31
           FYNGTV+VF++P DKAENILKL  +G         +  T+H+      LD DLP ARKKS
Sbjct: 99  FYNGTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTDHQQHLLASLDGDLPIARKKS 158

Query: 30  LQRFLEKRKE 1
           LQRFLEKRKE
Sbjct: 159 LQRFLEKRKE 168


>ref|XP_002297866.1| predicted protein [Populus trichocarpa] gi|222845124|gb|EEE82671.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 14/70 (20%)
 Frame = -1

Query: 171 FYNGTVSVFNMPHDKAENILKLAEDGNLKFTEHKLLD--------------KDLPFARKK 34
           FYNGTV+VFN+P DKAENILKLAE    K +   + D               DLP AR+K
Sbjct: 114 FYNGTVAVFNVPRDKAENILKLAEKRISKTSAEPMTDPKTDQQQLFESLDGADLPIARRK 173

Query: 33  SLQRFLEKRK 4
           SLQRFLEKRK
Sbjct: 174 SLQRFLEKRK 183


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