BLASTX nr result

ID: Coptis21_contig00031112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031112
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567329.1| PREDICTED: uncharacterized protein LOC100821...    74   2e-11
gb|EAZ14359.1| hypothetical protein OsJ_04279 [Oryza sativa Japo...    68   7e-10
gb|EAY76694.1| hypothetical protein OsI_04647 [Oryza sativa Indi...    68   7e-10
dbj|BAD81656.1| unknown protein [Oryza sativa Japonica Group] gi...    68   7e-10
ref|NP_001044978.1| Os01g0878000 [Oryza sativa Japonica Group] g...    68   7e-10

>ref|XP_003567329.1| PREDICTED: uncharacterized protein LOC100821099 [Brachypodium
           distachyon]
          Length = 155

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -3

Query: 214 AAADRGATTLKNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILPSHYEAEGSPQ 35
           AAAD  ATTL+NFGT ++AI+FGF ATAILI++FL+M IFEHL+KP   P+  E   S +
Sbjct: 25  AAADAEATTLRNFGTSMDAISFGFAATAILISIFLLMAIFEHLIKPHAFPTPDEPHPSRR 84

Query: 34  SNPS 23
              S
Sbjct: 85  RRSS 88


>gb|EAZ14359.1| hypothetical protein OsJ_04279 [Oryza sativa Japonica Group]
          Length = 199

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
 Frame = -3

Query: 214 AAADRG---ATTLKNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILP 65
           AAAD G   +T+L++FGT ++AI+FGF ATAIL++MFL+M IFEHL+KP + P
Sbjct: 65  AAADAGGEASTSLRDFGTSMDAISFGFAATAILVSMFLLMAIFEHLIKPHVFP 117


>gb|EAY76694.1| hypothetical protein OsI_04647 [Oryza sativa Indica Group]
          Length = 199

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
 Frame = -3

Query: 214 AAADRG---ATTLKNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILP 65
           AAAD G   +T+L++FGT ++AI+FGF ATAIL++MFL+M IFEHL+KP + P
Sbjct: 65  AAADAGGEASTSLRDFGTSMDAISFGFAATAILVSMFLLMAIFEHLIKPHVFP 117


>dbj|BAD81656.1| unknown protein [Oryza sativa Japonica Group]
           gi|56784739|dbj|BAD81888.1| unknown protein [Oryza
           sativa Japonica Group] gi|215686477|dbj|BAG87738.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 125

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
 Frame = -3

Query: 214 AAADRG---ATTLKNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILP 65
           AAAD G   +T+L++FGT ++AI+FGF ATAIL++MFL+M IFEHL+KP + P
Sbjct: 24  AAADAGGEASTSLRDFGTSMDAISFGFAATAILVSMFLLMAIFEHLIKPHVFP 76


>ref|NP_001044978.1| Os01g0878000 [Oryza sativa Japonica Group]
           gi|21952785|dbj|BAC06201.1| unknown protein [Oryza
           sativa Japonica Group] gi|22202668|dbj|BAC07326.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113534509|dbj|BAF06892.1| Os01g0878000 [Oryza sativa
           Japonica Group] gi|215737444|dbj|BAG96574.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765657|dbj|BAG87354.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 158

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
 Frame = -3

Query: 214 AAADRG---ATTLKNFGTPVNAIAFGFIATAILIAMFLIMGIFEHLLKPRILP 65
           AAAD G   +T+L++FGT ++AI+FGF ATAIL++MFL+M IFEHL+KP + P
Sbjct: 24  AAADAGGEASTSLRDFGTSMDAISFGFAATAILVSMFLLMAIFEHLIKPHVFP 76


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