BLASTX nr result

ID: Coptis21_contig00031110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031110
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 4...    90   2e-16
emb|CBI21565.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002304332.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_004145551.1| PREDICTED: probable protein phosphatase 2C 2...    83   2e-14
ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 2...    83   3e-14

>ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 47-like [Vitis vinifera]
          Length = 388

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -1

Query: 260 AMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDG 81
           AMED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  
Sbjct: 27  AMEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSE 84

Query: 80  KH-FLPIFRSGSWSEIGPKSYMEDEHI 3
           K  +LP+ RSGSWSEIGPK YMEDE+I
Sbjct: 85  KSGYLPVLRSGSWSEIGPKQYMEDEYI 111


>emb|CBI21565.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = -1

Query: 257 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDGK 78
           MED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  K
Sbjct: 1   MEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSEK 58

Query: 77  H-FLPIFRSGSWSEIGPKSYMEDEHI 3
             +LP+ RSGSWSEIGPK YMEDE+I
Sbjct: 59  SGYLPVLRSGSWSEIGPKQYMEDEYI 84


>ref|XP_002304332.1| predicted protein [Populus trichocarpa] gi|222841764|gb|EEE79311.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/86 (59%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -1

Query: 257 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPS-DG 81
           MEDE   + LDNS  Q+T GKPPR+   +RHC SS    D    +SEI   GL SPS + 
Sbjct: 1   MEDEKDEN-LDNS-NQLTTGKPPRNVKMVRHCSSSAFFTD---FESEIAILGLVSPSSEN 55

Query: 80  KHFLPIFRSGSWSEIGPKSYMEDEHI 3
             FLPIFRSGSWSE GPK YMEDEHI
Sbjct: 56  SVFLPIFRSGSWSEKGPKQYMEDEHI 81


>ref|XP_004145551.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis
           sativus] gi|449485097|ref|XP_004157069.1| PREDICTED:
           probable protein phosphatase 2C 27-like [Cucumis
           sativus]
          Length = 386

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/94 (50%), Positives = 55/94 (58%)
 Frame = -1

Query: 284 GLVKDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFR 105
           G  KD     +DE       NS KQM+ GKPPR    MRH VSS +L+  ++   + E  
Sbjct: 18  GYSKDNVSPTDDESSDSF--NSLKQMSSGKPPRHLSVMRHSVSSLKLIGQADLSLDAETL 75

Query: 104 GLKSPSDGKHFLPIFRSGSWSEIGPKSYMEDEHI 3
           G KSP     FLP+FRSGS SE GPK YMEDEHI
Sbjct: 76  GNKSPDGKAGFLPVFRSGSCSERGPKQYMEDEHI 109


>ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 27 isoform 2 [Vitis
           vinifera]
          Length = 385

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -1

Query: 296 VLKIGLVKDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSE 117
           +L +G  K     MEDE  ++   ++ KQ+T GKPPR    MRHC+SS RL+  ++ +  
Sbjct: 13  LLDVGYSKVNVSVMEDENSNN--SDNLKQLTNGKPPRHLSVMRHCISSARLLAATDFELG 70

Query: 116 IEFRGLKSPSDGKH-FLPIFRSGSWSEIGPKSYMEDEHI 3
                +KSP DGK  FLP+FRSGS +E GPK YMEDEHI
Sbjct: 71  TGMI-VKSPPDGKSGFLPVFRSGSCAERGPKQYMEDEHI 108


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