BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031091
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]    70   1e-10
emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]    70   1e-10
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...    65   7e-09
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/54 (53%), Positives = 36/54 (66%)
 Frame = -3

Query: 499 GCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLADLALEMKEAGYIPSFSCSNGDV 338
           GCSW+E+   VNCF S+D KHPQC  IY  L  LA+EMK+AGY P  +   G +
Sbjct: 767 GCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGGI 820


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/54 (53%), Positives = 36/54 (66%)
 Frame = -3

Query: 499 GCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLADLALEMKEAGYIPSFSCSNGDV 338
           GCSW+E+   VNCF S+D KHPQC  IY  L  LA+EMK+AGY P  +   G +
Sbjct: 767 GCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGGI 820


>emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]
          Length = 102

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/54 (53%), Positives = 36/54 (66%)
 Frame = -3

Query: 499 GCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLADLALEMKEAGYIPSFSCSNGDV 338
           GCSW+E+   VNCF S+D KHPQC  IY  L  LA+EMK+AGY P  +   G +
Sbjct: 44  GCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGGI 97


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = -3

Query: 499 GCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLADLALEMKEAGYIPSFS 356
           GCSW+EI   VNCF S+D+KHPQ   IY  L  L L+MK AGY P +S
Sbjct: 770 GCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYS 817


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = -3

Query: 499 GCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLADLALEMKEAGYIP 365
           G SWIEI   +N F SKD+KHPQ D IY+ L +L +EMK AGY P
Sbjct: 759 GSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 803