BLASTX nr result

ID: Coptis21_contig00031089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031089
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526952.1| Pectate lyase precursor, putative [Ricinus c...   159   3e-37
ref|NP_001234029.1| probable pectate lyase P18 precursor [Solanu...   159   3e-37
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   158   5e-37
ref|XP_003549833.1| PREDICTED: probable pectate lyase 22 isoform...   157   6e-37
ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform...   157   6e-37

>ref|XP_002526952.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223533704|gb|EEF35439.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 396

 Score =  159 bits (401), Expect = 3e-37
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 GSTGVTISNNFFSHHDKVMLLGHSDKYDGDRGMQVTVAFNHFGENLVERMPRCRWGYFHV 85
           GST +T+SNNFF+HHDKVMLLGHSD Y  D+ MQVT+AFNHFGE LV+RMPRCR GYFHV
Sbjct: 226 GSTAITLSNNFFTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHV 285

Query: 84  VNNDYTQWGEYAVGGSSSPTINSQGNRF 1
           VNNDYT W  YA+GGS+SPTINSQGNRF
Sbjct: 286 VNNDYTHWEMYAIGGSASPTINSQGNRF 313


>ref|NP_001234029.1| probable pectate lyase P18 precursor [Solanum lycopersicum]
           gi|112863|sp|P24396.1|PEL18_SOLLC RecName: Full=Probable
           pectate lyase P18; AltName: Full=Style
           development-specific protein 9612; Flags: Precursor
           gi|19162|emb|CAA38979.1| 9612 [Solanum lycopersicum]
          Length = 404

 Score =  159 bits (401), Expect = 3e-37
 Identities = 70/88 (79%), Positives = 79/88 (89%)
 Frame = -1

Query: 264 GSTGVTISNNFFSHHDKVMLLGHSDKYDGDRGMQVTVAFNHFGENLVERMPRCRWGYFHV 85
           GST +TISNN+F+HHDKVMLLGHSD +  D+GMQVTVAFNHFGE LV+RMPRCR GYFHV
Sbjct: 232 GSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHV 291

Query: 84  VNNDYTQWGEYAVGGSSSPTINSQGNRF 1
           VNNDYT W  YA+GGS++PTINSQGNRF
Sbjct: 292 VNNDYTHWEMYAIGGSAAPTINSQGNRF 319


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  158 bits (399), Expect = 5e-37
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = -1

Query: 264 GSTGVTISNNFFSHHDKVMLLGHSDKYDGDRGMQVTVAFNHFGENLVERMPRCRWGYFHV 85
           GSTG+TISNN+FSHHD+VMLLGH DKY  D GMQVT+AFNHFGE LV+RMPRCR GY HV
Sbjct: 250 GSTGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHV 309

Query: 84  VNNDYTQWGEYAVGGSSSPTINSQGNRF 1
           VNND+TQW  YA+GGS++PTINSQGNR+
Sbjct: 310 VNNDFTQWEMYAIGGSANPTINSQGNRY 337


>ref|XP_003549833.1| PREDICTED: probable pectate lyase 22 isoform 2 [Glycine max]
          Length = 384

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/88 (78%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 GSTGVTISNNFFSHHDKVMLLGHSDKYDGDRGMQVTVAFNHFGENLVERMPRCRWGYFHV 85
           GSTG+TISNN+ +HHDKVMLLGHSD Y  D+ MQVT+AFNHFGE LV+RMPRCR GYFHV
Sbjct: 214 GSTGITISNNYMTHHDKVMLLGHSDSYTQDKSMQVTIAFNHFGEGLVQRMPRCRHGYFHV 273

Query: 84  VNNDYTQWGEYAVGGSSSPTINSQGNRF 1
           VNNDYT W  YA+GGS++PTINSQGNRF
Sbjct: 274 VNNDYTHWEMYAIGGSANPTINSQGNRF 301


>ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform 1 [Glycine max]
          Length = 406

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/88 (78%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 GSTGVTISNNFFSHHDKVMLLGHSDKYDGDRGMQVTVAFNHFGENLVERMPRCRWGYFHV 85
           GSTG+TISNN+ +HHDKVMLLGHSD Y  D+ MQVT+AFNHFGE LV+RMPRCR GYFHV
Sbjct: 236 GSTGITISNNYMTHHDKVMLLGHSDSYTQDKSMQVTIAFNHFGEGLVQRMPRCRHGYFHV 295

Query: 84  VNNDYTQWGEYAVGGSSSPTINSQGNRF 1
           VNNDYT W  YA+GGS++PTINSQGNRF
Sbjct: 296 VNNDYTHWEMYAIGGSANPTINSQGNRF 323


Top