BLASTX nr result

ID: Coptis21_contig00031080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031080
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133817.1| PREDICTED: psbQ-like protein 1, chloroplasti...    64   1e-08
ref|XP_002890040.1| hypothetical protein ARALYDRAFT_471574 [Arab...    64   2e-08
ref|XP_002272064.1| PREDICTED: oxygen-evolving enhancer protein ...    62   5e-08
dbj|BAF01486.1| hypothetical protein [Arabidopsis thaliana]            60   1e-07
ref|NP_563937.1| photosystem II oxygen-evolving enhancer protein...    60   1e-07

>ref|XP_004133817.1| PREDICTED: psbQ-like protein 1, chloroplastic-like [Cucumis
           sativus] gi|449477919|ref|XP_004155162.1| PREDICTED:
           psbQ-like protein 1, chloroplastic-like [Cucumis
           sativus]
          Length = 187

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   LDYYVRTPKIYESYLYYEKTLKSLDDLVELLA 96
           LDYYVRTPK+YESYLYYEKTLKS+DDLV LLA
Sbjct: 156 LDYYVRTPKVYESYLYYEKTLKSIDDLVALLA 187


>ref|XP_002890040.1| hypothetical protein ARALYDRAFT_471574 [Arabidopsis lyrata subsp.
           lyrata] gi|297335882|gb|EFH66299.1| hypothetical protein
           ARALYDRAFT_471574 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   LDYYVRTPKIYESYLYYEKTLKSLDDLVELLA 96
           LDYYVRTPK+YESYLYYEKTLKS+D++VELLA
Sbjct: 158 LDYYVRTPKVYESYLYYEKTLKSIDNVVELLA 189


>ref|XP_002272064.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic
           [Vitis vinifera] gi|296086349|emb|CBI31938.3| unnamed
           protein product [Vitis vinifera]
          Length = 188

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +1

Query: 4   DYYVRTPKIYESYLYYEKTLKSLDDLVELLA 96
           DYYVRTPK+YESYLYYEKTLKS+DDLV +LA
Sbjct: 158 DYYVRTPKVYESYLYYEKTLKSIDDLVAMLA 188


>dbj|BAF01486.1| hypothetical protein [Arabidopsis thaliana]
          Length = 182

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   LDYYVRTPKIYESYLYYEKTLKSLDDLVELLA 96
           LD+YVRTPK+YESYLYYEKTLKS+D++VE LA
Sbjct: 151 LDFYVRTPKVYESYLYYEKTLKSIDNVVEFLA 182


>ref|NP_563937.1| photosystem II oxygen-evolving enhancer protein [Arabidopsis
           thaliana] gi|75215661|sp|Q9XI73.1|PQL1_ARATH RecName:
           Full=PsbQ-like protein 1, chloroplastic; AltName:
           Full=Photosynthetic NDH subcomplex L 2; Flags: Precursor
           gi|5080787|gb|AAD39297.1|AC007576_20 Unknown protein
           [Arabidopsis thaliana]
           gi|13926216|gb|AAK49585.1|AF370579_1 Unknown protein
           [Arabidopsis thaliana] gi|21593897|gb|AAM65864.1|
           unknown [Arabidopsis thaliana]
           gi|24417380|gb|AAN60300.1| unknown [Arabidopsis
           thaliana] gi|332190991|gb|AEE29112.1| photosystem II
           oxygen-evolving enhancer protein [Arabidopsis thaliana]
          Length = 190

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   LDYYVRTPKIYESYLYYEKTLKSLDDLVELLA 96
           LD+YVRTPK+YESYLYYEKTLKS+D++VE LA
Sbjct: 159 LDFYVRTPKVYESYLYYEKTLKSIDNVVEFLA 190


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