BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030959
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   179   2e-43
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  180 bits (456), Expect = 1e-43
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = -3

Query: 377 SQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQDG 198
           SQPDVVTYNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC +FL  LREK +PPQDG
Sbjct: 517 SQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDG 576

Query: 197 RDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCR 18
           R+FLDGLV++L+KR+R+  ASKIVEVMLQK   PK STW RVV+DLC  +KVQA I+ C 
Sbjct: 577 REFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCW 636

Query: 17  SKLF 6
           S L+
Sbjct: 637 SILY 640



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/119 (31%), Positives = 56/119 (47%)
 Frame = -3

Query: 380 KSQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQD 201
           K QPDV TY  L++GLCK + I +A+ LL+ M   GC P  +T NV              
Sbjct: 199 KCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV-------------- 244

Query: 200 GRDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIEL 24
                  L+  L K+  +   +K+V+ M  K  +P   T+  ++  LC   K++  I L
Sbjct: 245 -------LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISL 296


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/124 (68%), Positives = 105/124 (84%)
 Frame = -3

Query: 377 SQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQDG 198
           SQPDV+TYNIL   LCK ++IS+A+DLLNSMLDRGCDPDL+TCN+FL +LREK +PPQDG
Sbjct: 529 SQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDG 588

Query: 197 RDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCR 18
             FLD LV++L+KR+R   ASKIVEVMLQK+ SPKASTW RVV +LC+ +K+QA I+ C 
Sbjct: 589 AKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCW 648

Query: 17  SKLF 6
           SKL+
Sbjct: 649 SKLY 652


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  179 bits (453), Expect = 3e-43
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = -3

Query: 377 SQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQDG 198
           SQPDVVTYNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCN+FL  LREK NPPQDG
Sbjct: 520 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 579

Query: 197 RDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCR 18
           R+FLD LV++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C 
Sbjct: 580 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCW 639

Query: 17  SKLF 6
           S LF
Sbjct: 640 SSLF 643



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/119 (29%), Positives = 54/119 (45%)
 Frame = -3

Query: 380 KSQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQD 201
           K +PDV TY  L++GLCK + I +A+ LL+ M   GC P  +T NV              
Sbjct: 202 KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV-------------- 247

Query: 200 GRDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIEL 24
                  L+  L K+  +   +K+V+ M  K   P   T+  ++  LC   K+   + L
Sbjct: 248 -------LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 299


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  179 bits (453), Expect = 3e-43
 Identities = 86/124 (69%), Positives = 103/124 (83%)
 Frame = -3

Query: 377 SQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQDG 198
           SQPDVVTYNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCN+FL  LREK NPPQDG
Sbjct: 536 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 595

Query: 197 RDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCR 18
           R+FLD LV++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C 
Sbjct: 596 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCW 655

Query: 17  SKLF 6
           S LF
Sbjct: 656 SSLF 659



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/119 (29%), Positives = 54/119 (45%)
 Frame = -3

Query: 380 KSQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQD 201
           K +PDV TY  L++GLCK + I +A+ LL+ M   GC P  +T NV              
Sbjct: 218 KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV-------------- 263

Query: 200 GRDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIEL 24
                  L+  L K+  +   +K+V+ M  K   P   T+  ++  LC   K+   + L
Sbjct: 264 -------LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 315


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/124 (68%), Positives = 105/124 (84%)
 Frame = -3

Query: 377 SQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQDG 198
           SQPDVVTYNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC +FL +LREK +PPQDG
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDG 606

Query: 197 RDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCR 18
           R+FLD LV++L+KR+R+  ASKIVEVMLQK   PK STW RVV++LC+ +KVQA I+ C 
Sbjct: 607 REFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCW 666

Query: 17  SKLF 6
           S L+
Sbjct: 667 SILY 670



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/119 (31%), Positives = 56/119 (47%)
 Frame = -3

Query: 380 KSQPDVVTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNVFLMILREKQNPPQD 201
           K +PDV TY  L++GLCK + I +A+ LL+ M   GC P  +T NV              
Sbjct: 229 KCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV-------------- 274

Query: 200 GRDFLDGLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIEL 24
                  L+  L K+  +  A+K+V+ M  K   P   T+  ++  LC   K++  I L
Sbjct: 275 -------LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISL 326