BLASTX nr result

ID: Coptis21_contig00030935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030935
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595873.1| ABC transporter D family member [Medicago tr...   332   3e-89
gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region...   332   3e-89
ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici...   330   6e-89
emb|CBI24120.3| unnamed protein product [Vitis vinifera]              330   8e-89
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   330   8e-89

>ref|XP_003595873.1| ABC transporter D family member [Medicago truncatula]
           gi|355484921|gb|AES66124.1| ABC transporter D family
           member [Medicago truncatula]
          Length = 906

 Score =  332 bits (850), Expect = 3e-89
 Identities = 168/179 (93%), Positives = 177/179 (98%)
 Frame = +2

Query: 5   FNAAIDLISFSNILYGIYPPLFGVLLAYSIGGTALSVYLGRGLVTLNFLQEKKEADFRYG 184
           FNAAIDLISFSNILYGIYPPLF VLL YSIGGTA+SV+LG+GLVTLNFLQEKKEADFRYG
Sbjct: 408 FNAAIDLISFSNILYGIYPPLFVVLLIYSIGGTAISVFLGKGLVTLNFLQEKKEADFRYG 467

Query: 185 LVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYRYLIQILP 364
           LVRVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLLISSRNLEFFTNGYRY+IQ+LP
Sbjct: 468 LVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYRYVIQVLP 527

Query: 365 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDLL 541
           AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVI+RLGEFDD+L
Sbjct: 528 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDIL 586


>gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region, type 1 [Medicago
           truncatula]
          Length = 613

 Score =  332 bits (850), Expect = 3e-89
 Identities = 168/179 (93%), Positives = 177/179 (98%)
 Frame = +2

Query: 5   FNAAIDLISFSNILYGIYPPLFGVLLAYSIGGTALSVYLGRGLVTLNFLQEKKEADFRYG 184
           FNAAIDLISFSNILYGIYPPLF VLL YSIGGTA+SV+LG+GLVTLNFLQEKKEADFRYG
Sbjct: 115 FNAAIDLISFSNILYGIYPPLFVVLLIYSIGGTAISVFLGKGLVTLNFLQEKKEADFRYG 174

Query: 185 LVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYRYLIQILP 364
           LVRVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLLISSRNLEFFTNGYRY+IQ+LP
Sbjct: 175 LVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYRYVIQVLP 234

Query: 365 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDLL 541
           AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVI+RLGEFDD+L
Sbjct: 235 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGEFDDIL 293


>ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis]
           gi|223546467|gb|EEF47966.1| peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 742

 Score =  330 bits (847), Expect = 6e-89
 Identities = 166/179 (92%), Positives = 176/179 (98%)
 Frame = +2

Query: 5   FNAAIDLISFSNILYGIYPPLFGVLLAYSIGGTALSVYLGRGLVTLNFLQEKKEADFRYG 184
           FNAA+DLISFSNILYGIYPPLF VLL YS+GGTA+S+YLGRGLV LNFLQEKKEADFRYG
Sbjct: 239 FNAAVDLISFSNILYGIYPPLFIVLLLYSVGGTAISLYLGRGLVNLNFLQEKKEADFRYG 298

Query: 185 LVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYRYLIQILP 364
           LVRVRENAESIAFYGGE+NEMQLLLQRF++AFENL++LLISSRNLEFFTNGYRYLIQILP
Sbjct: 299 LVRVRENAESIAFYGGEDNEMQLLLQRFRNAFENLTELLISSRNLEFFTNGYRYLIQILP 358

Query: 365 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDLL 541
           AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDD+L
Sbjct: 359 AAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDVL 417


>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  330 bits (846), Expect = 8e-89
 Identities = 166/180 (92%), Positives = 176/180 (97%)
 Frame = +2

Query: 2   FFNAAIDLISFSNILYGIYPPLFGVLLAYSIGGTALSVYLGRGLVTLNFLQEKKEADFRY 181
           FFNAA+DLISFSNILYGIYPPLF VLL YSIGGTA+SV+LGRGLV LNFLQEKKEADFRY
Sbjct: 213 FFNAAVDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRGLVNLNFLQEKKEADFRY 272

Query: 182 GLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYRYLIQIL 361
           GLVR+RENAESIAFY GEE+EMQLL+QRF+SAFENL+QLLISSRNLEFFT+GYRYLIQIL
Sbjct: 273 GLVRIRENAESIAFYSGEESEMQLLIQRFRSAFENLTQLLISSRNLEFFTSGYRYLIQIL 332

Query: 362 PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDLL 541
           PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDD+L
Sbjct: 333 PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDIL 392


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score =  330 bits (846), Expect = 8e-89
 Identities = 166/180 (92%), Positives = 176/180 (97%)
 Frame = +2

Query: 2   FFNAAIDLISFSNILYGIYPPLFGVLLAYSIGGTALSVYLGRGLVTLNFLQEKKEADFRY 181
           FFNAA+DLISFSNILYGIYPPLF VLL YSIGGTA+SV+LGRGLV LNFLQEKKEADFRY
Sbjct: 213 FFNAAVDLISFSNILYGIYPPLFVVLLVYSIGGTAISVFLGRGLVNLNFLQEKKEADFRY 272

Query: 182 GLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYRYLIQIL 361
           GLVR+RENAESIAFY GEE+EMQLL+QRF+SAFENL+QLLISSRNLEFFT+GYRYLIQIL
Sbjct: 273 GLVRIRENAESIAFYSGEESEMQLLIQRFRSAFENLTQLLISSRNLEFFTSGYRYLIQIL 332

Query: 362 PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDLL 541
           PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDD+L
Sbjct: 333 PAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLGEFDDIL 392


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