BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030892
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...    99   5e-19
ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...    95   7e-18
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...    92   4e-17
ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methy...    85   7e-15

>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -3

Query: 271 SLSLPTFIKHLTPAPH-------FSTSRPNLTTYCSNQVSPLLQTLNSRQKEQISLYINV 113
           S SL TFIK  +P P          TS   LT  C++      +TL SRQK+Q+ L+++ 
Sbjct: 6   SFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRFLHFETLTSRQKDQVHLFVDA 65

Query: 112 LQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQN 5
           L +WN+KMNLTA+TE NEVM+RHVEDSLAIIPPI+N
Sbjct: 66  LLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRN 101


>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
 Frame = -3

Query: 292 KIPNIYHSLSLPTFIKHLTPA------PHFSTSRPNLTTYCSNQVSPLLQTLNSRQKEQI 131
           K+P +   LS+ TF+K +T +      PH   ++   TT   N  S   +TLN  QK+QI
Sbjct: 7   KVPGVSSPLSVGTFVKQVTTSISTRFRPHRIATKTLTTTKVLN--SSYFETLNPLQKQQI 64

Query: 130 SLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNS 2
           SLY++ L +WN+KMNLTAVT+ +EVM+RHV DSLA+IPPIQ+S
Sbjct: 65  SLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSS 107


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
           truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA
           small subunit methyltransferase G [Medicago truncatula]
          Length = 518

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 256 TFIKHLTPAPHFSTSRPNLTTYCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTA 77
           TF KHLTP  + +  + N T+  S+ +     TL SRQK+QI LY++ L +WNK+MNLTA
Sbjct: 248 TFFKHLTPRKYTTLCQNNSTSNLSHFL-----TLTSRQKDQIHLYVDTLLQWNKRMNLTA 302

Query: 76  VTETNEVMKRHVEDSLAIIPPIQNS 2
           V E NEVM+RH+EDSLAI+PP+ ++
Sbjct: 303 VKEVNEVMERHIEDSLAILPPLSDN 327


>ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
 Frame = -3

Query: 292 KIPNIYHSLSLPTFIKHLTPA-----PHFSTSRPNLTTYCS--NQVSPLLQTLNSRQKEQ 134
           K P +   LSL TF+KH +       P       +LT   S     S    + + RQK+Q
Sbjct: 7   KPPAVPFPLSLGTFVKHFSVIEPKAFPLHRIKAKSLTAAASIGTHNSSCFDSFSCRQKKQ 66

Query: 133 ISLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNS 2
           I LY++ L +WN+KMNLTAVT+ +EVM+RH+EDSLAI+PPIQ+S
Sbjct: 67  IRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDS 110


>ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Glycine max]
          Length = 274

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/84 (53%), Positives = 54/84 (64%)
 Frame = -3

Query: 256 TFIKHLTPAPHFSTSRPNLTTYCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTA 77
           TF KHLTP        P L  + S         L SRQK+QI LY+  L +WNK+MNLTA
Sbjct: 14  TFFKHLTPRKF--KLAPPLCQHKSVATLSHFGILTSRQKDQIHLYVETLLQWNKRMNLTA 71

Query: 76  VTETNEVMKRHVEDSLAIIPPIQN 5
           V E NEVM+RHVEDSLAI+PP+ +
Sbjct: 72  VREVNEVMERHVEDSLAILPPLSD 95