BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030758
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   131   1e-42
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-42
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...   142   1e-42
ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-41
emb|CBI16090.3| unnamed protein product [Vitis vinifera]              137   1e-41

>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  131 bits (330), Expect(2) = 1e-42
 Identities = 61/105 (58%), Positives = 80/105 (76%)
 Frame = +3

Query: 114 NYACIVDLLGRAGNLDEAGLFISNMPMMPGPSVYKVLLSACRVHGNVDIATRSAKRLLEL 293
           +YA +VDL GRAG L EA  FI ++P+ PG S+YK LLSAC +HGN DIA R+AK+LLEL
Sbjct: 512 HYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLEL 571

Query: 294 CPNDPATFVLLSSVFAERGYWNDAAEMRDLMYERGMRKKPGCSWI 428
            P DPAT+++LS+     GYW+DAA +R LM  RG++K+PG SW+
Sbjct: 572 YPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616



 Score = 66.6 bits (161), Expect(2) = 1e-42
 Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   FLSVLTACSHVGLLDRGLHYFDLMRDGS-VEPPKMEHYATM 120
           FL+VLTACSHVGLLD+GL YF LMR+   VEPPK+EHYAT+
Sbjct: 476 FLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATL 516


>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  131 bits (330), Expect(2) = 1e-42
 Identities = 61/105 (58%), Positives = 80/105 (76%)
 Frame = +3

Query: 114 NYACIVDLLGRAGNLDEAGLFISNMPMMPGPSVYKVLLSACRVHGNVDIATRSAKRLLEL 293
           +YA +VDL GRAG L EA  FI ++P+ PG S+YK LLSAC +HGN DIA R+AK+LLEL
Sbjct: 512 HYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLEL 571

Query: 294 CPNDPATFVLLSSVFAERGYWNDAAEMRDLMYERGMRKKPGCSWI 428
            P DPAT+++LS+     GYW+DAA +R LM  RG++K+PG SW+
Sbjct: 572 YPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616



 Score = 66.6 bits (161), Expect(2) = 1e-42
 Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   FLSVLTACSHVGLLDRGLHYFDLMRDGS-VEPPKMEHYATM 120
           FL+VLTACSHVGLLD+GL YF LMR+   VEPPK+EHYAT+
Sbjct: 476 FLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATL 516


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  142 bits (357), Expect(2) = 1e-42
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = +3

Query: 114 NYACIVDLLGRAGNLDEAGLFISNMPMMPGPSVYKVLLSACRVHGNVDIATRSAKRLLEL 293
           +YA +VD+ GRAG L EA   I+ MPM PGPSVYK LLSAC VHGN +IA RSA++LLEL
Sbjct: 502 HYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLEL 561

Query: 294 CPNDPATFVLLSSVFAERGYWNDAAEMRDLMYERGMRKKPGCSWI 428
            P+DPAT++LLS++ A  GYW+DAA++R LM +RG+RK PG SWI
Sbjct: 562 WPDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606



 Score = 56.2 bits (134), Expect(2) = 1e-42
 Identities = 26/41 (63%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   FLSVLTACSHVGLLDRGLHYFDLMR-DGSVEPPKMEHYATM 120
           FL+VL+ACSHVG +D+GL YFD MR D S+EP ++EHYA++
Sbjct: 466 FLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASV 506


>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  137 bits (345), Expect(2) = 1e-41
 Identities = 64/105 (60%), Positives = 83/105 (79%)
 Frame = +3

Query: 114 NYACIVDLLGRAGNLDEAGLFISNMPMMPGPSVYKVLLSACRVHGNVDIATRSAKRLLEL 293
           +Y+ +VDL  RAG L EA  FI+ MP+ PGPSVYK LLSAC+VHGNV+IA R AK+LL++
Sbjct: 524 HYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQM 583

Query: 294 CPNDPATFVLLSSVFAERGYWNDAAEMRDLMYERGMRKKPGCSWI 428
           CPNDP  +VLLS+V A  GYW++ A +R +M +RG+RK+PG SWI
Sbjct: 584 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628



 Score = 57.8 bits (138), Expect(2) = 1e-41
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   FLSVLTACSHVGLLDRGLHYFDLMR-DGSVEPPKMEHYATM 120
           FL VL+AC HVGLLD+GL YFDLMR D S+E P  EHY++M
Sbjct: 488 FLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSM 528


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  137 bits (345), Expect(2) = 1e-41
 Identities = 64/105 (60%), Positives = 83/105 (79%)
 Frame = +3

Query: 114 NYACIVDLLGRAGNLDEAGLFISNMPMMPGPSVYKVLLSACRVHGNVDIATRSAKRLLEL 293
           +Y+ +VDL  RAG L EA  FI+ MP+ PGPSVYK LLSAC+VHGNV+IA R AK+LL++
Sbjct: 354 HYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQM 413

Query: 294 CPNDPATFVLLSSVFAERGYWNDAAEMRDLMYERGMRKKPGCSWI 428
           CPNDP  +VLLS+V A  GYW++ A +R +M +RG+RK+PG SWI
Sbjct: 414 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 458



 Score = 57.8 bits (138), Expect(2) = 1e-41
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   FLSVLTACSHVGLLDRGLHYFDLMR-DGSVEPPKMEHYATM 120
           FL VL+AC HVGLLD+GL YFDLMR D S+E P  EHY++M
Sbjct: 318 FLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSM 358