BLASTX nr result

ID: Coptis21_contig00030673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030673
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   122   2e-26
emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]   122   2e-26
ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like...   115   5e-24
ref|XP_003519898.1| PREDICTED: GATA transcription factor 18-like...   115   5e-24
emb|CBI17512.3| unnamed protein product [Vitis vinifera]              113   1e-23

>ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like
           [Vitis vinifera]
          Length = 294

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/117 (56%), Positives = 72/117 (61%), Gaps = 19/117 (16%)
 Frame = -3

Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344
           TTSTPLWRNGPRGPKSLCNACGIR+KKEERR             +M+PQH M  HH NSW
Sbjct: 180 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 239

Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSWRLNVP-----VHDYS 230
            H              GNEFRFI D D DSD+    IPFLSWRLNV      VHD++
Sbjct: 240 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSWRLNVTDRPSLVHDFT 293


>emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]
          Length = 324

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/117 (56%), Positives = 72/117 (61%), Gaps = 19/117 (16%)
 Frame = -3

Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344
           TTSTPLWRNGPRGPKSLCNACGIR+KKEERR             +M+PQH M  HH NSW
Sbjct: 210 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 269

Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSWRLNVP-----VHDYS 230
            H              GNEFRFI D D DSD+    IPFLSWRLNV      VHD++
Sbjct: 270 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSWRLNVTDRPSLVHDFT 323


>ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like [Glycine max]
          Length = 251

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/104 (56%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
 Frame = -3

Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERR-XXXXXXXXXXXXTIMDPQHYMGHHHMNS 347
           TTSTPLWRNGPRGPKSLCNACGIR+KKEERR               M+     GHHH NS
Sbjct: 138 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATSTAVPEGEMELARVYGHHHNNS 197

Query: 346 W----------THQGNEFRFIDQDTDSDSANNTIPFLSWRLNVP 245
           W             GNE RF+D   D DS NN IPFLSW+LNVP
Sbjct: 198 WYAAHSQNQKMMMMGNELRFMDDSEDRDSENNGIPFLSWKLNVP 241


>ref|XP_003519898.1| PREDICTED: GATA transcription factor 18-like [Glycine max]
          Length = 239

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/103 (55%), Positives = 63/103 (61%), Gaps = 10/103 (9%)
 Frame = -3

Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERR---XXXXXXXXXXXXTIMDPQHYMGHHHM 353
           TTSTPLWRNGPRGPKSLCNACGIR+KKE+RR                 M+     GHHH 
Sbjct: 127 TTSTPLWRNGPRGPKSLCNACGIRFKKEQRRASAAGATSASAAVPGGAMESARVYGHHHN 186

Query: 352 NSW-------THQGNEFRFIDQDTDSDSANNTIPFLSWRLNVP 245
           NSW          GNE RF+D   D DS NN IPFLSW+LN+P
Sbjct: 187 NSWYAHSQSQKMMGNELRFMDDSDDRDSDNNGIPFLSWKLNIP 229


>emb|CBI17512.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/102 (57%), Positives = 63/102 (61%), Gaps = 14/102 (13%)
 Frame = -3

Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344
           TTSTPLWRNGPRGPKSLCNACGIR+KKEERR             +M+PQH M  HH NSW
Sbjct: 118 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 177

Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSW 260
            H              GNEFRFI D D DSD+    IPFLSW
Sbjct: 178 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSW 216


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