BLASTX nr result
ID: Coptis21_contig00030673
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030673 (525 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr... 122 2e-26 emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera] 122 2e-26 ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like... 115 5e-24 ref|XP_003519898.1| PREDICTED: GATA transcription factor 18-like... 115 5e-24 emb|CBI17512.3| unnamed protein product [Vitis vinifera] 113 1e-23 >ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like [Vitis vinifera] Length = 294 Score = 122 bits (307), Expect = 2e-26 Identities = 66/117 (56%), Positives = 72/117 (61%), Gaps = 19/117 (16%) Frame = -3 Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344 TTSTPLWRNGPRGPKSLCNACGIR+KKEERR +M+PQH M HH NSW Sbjct: 180 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 239 Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSWRLNVP-----VHDYS 230 H GNEFRFI D D DSD+ IPFLSWRLNV VHD++ Sbjct: 240 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSWRLNVTDRPSLVHDFT 293 >emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera] Length = 324 Score = 122 bits (307), Expect = 2e-26 Identities = 66/117 (56%), Positives = 72/117 (61%), Gaps = 19/117 (16%) Frame = -3 Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344 TTSTPLWRNGPRGPKSLCNACGIR+KKEERR +M+PQH M HH NSW Sbjct: 210 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 269 Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSWRLNVP-----VHDYS 230 H GNEFRFI D D DSD+ IPFLSWRLNV VHD++ Sbjct: 270 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSWRLNVTDRPSLVHDFT 323 >ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like [Glycine max] Length = 251 Score = 115 bits (287), Expect = 5e-24 Identities = 59/104 (56%), Positives = 63/104 (60%), Gaps = 11/104 (10%) Frame = -3 Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERR-XXXXXXXXXXXXTIMDPQHYMGHHHMNS 347 TTSTPLWRNGPRGPKSLCNACGIR+KKEERR M+ GHHH NS Sbjct: 138 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATSTAVPEGEMELARVYGHHHNNS 197 Query: 346 W----------THQGNEFRFIDQDTDSDSANNTIPFLSWRLNVP 245 W GNE RF+D D DS NN IPFLSW+LNVP Sbjct: 198 WYAAHSQNQKMMMMGNELRFMDDSEDRDSENNGIPFLSWKLNVP 241 >ref|XP_003519898.1| PREDICTED: GATA transcription factor 18-like [Glycine max] Length = 239 Score = 115 bits (287), Expect = 5e-24 Identities = 57/103 (55%), Positives = 63/103 (61%), Gaps = 10/103 (9%) Frame = -3 Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERR---XXXXXXXXXXXXTIMDPQHYMGHHHM 353 TTSTPLWRNGPRGPKSLCNACGIR+KKE+RR M+ GHHH Sbjct: 127 TTSTPLWRNGPRGPKSLCNACGIRFKKEQRRASAAGATSASAAVPGGAMESARVYGHHHN 186 Query: 352 NSW-------THQGNEFRFIDQDTDSDSANNTIPFLSWRLNVP 245 NSW GNE RF+D D DS NN IPFLSW+LN+P Sbjct: 187 NSWYAHSQSQKMMGNELRFMDDSDDRDSDNNGIPFLSWKLNIP 229 >emb|CBI17512.3| unnamed protein product [Vitis vinifera] Length = 285 Score = 113 bits (283), Expect = 1e-23 Identities = 59/102 (57%), Positives = 63/102 (61%), Gaps = 14/102 (13%) Frame = -3 Query: 523 TTSTPLWRNGPRGPKSLCNACGIRYKKEERRXXXXXXXXXXXXTIMDPQHYMGHHHMNSW 344 TTSTPLWRNGPRGPKSLCNACGIR+KKEERR +M+PQH M HH NSW Sbjct: 118 TTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHHNNSW 177 Query: 343 TH-------------QGNEFRFI-DQDTDSDSANNTIPFLSW 260 H GNEFRFI D D DSD+ IPFLSW Sbjct: 178 VHHSQTQKMPCLSPAMGNEFRFIEDDDRDSDTG---IPFLSW 216