BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030663
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19832.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   184   8e-45
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43

>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  192 bits (489), Expect = 2e-47
 Identities = 96/141 (68%), Positives = 112/141 (79%)
 Frame = +3

Query: 6   LANHYASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGHILNRLIDIYSKSRDLNSARL 185
           LAN YA+QLQ CCP  P S+ +ART+HA MI SGFKPRG+ILNRLID+Y KS DL SA  
Sbjct: 10  LANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHH 69

Query: 186 LFDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGY 365
           LFD I +PDIVARTTLIAA S+AG+   AR I  +TPL IRDTV YNAMITGYSHNNDG+
Sbjct: 70  LFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGF 129

Query: 366 NAVKLFSEMRRDQFRPDTFTF 428
            A++LF ++ R+ FRPD FTF
Sbjct: 130 GAIELFRDLLRNGFRPDNFTF 150



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
 Frame = +3

Query: 66  KLARTLHAQMITSGFKPRGHILNRLIDIY---------SKSRDLNSARLLFDAIPEPDIV 218
           K  + +H  ++ SG      +LN L+ ++         S S  + +AR LFD + E D +
Sbjct: 165 KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDEL 224

Query: 219 ARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRR 398
           + TT+IA     G+L  AR  L+    K+   V++NAMI+GY H+     A+++F +M  
Sbjct: 225 SWTTMIAGYVRNGELDAARQFLDGMTEKL--VVAWNAMISGYVHHGFFLEALEMFRKMYL 282

Query: 399 DQFRPDTFTF 428
              + D FT+
Sbjct: 283 LGIQWDEFTY 292


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  192 bits (489), Expect = 2e-47
 Identities = 96/141 (68%), Positives = 112/141 (79%)
 Frame = +3

Query: 6   LANHYASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGHILNRLIDIYSKSRDLNSARL 185
           LAN YA+QLQ CCP  P S+ +ART+HA MI SGFKPRG+ILNRLID+Y KS DL SA  
Sbjct: 12  LANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHH 71

Query: 186 LFDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGY 365
           LFD I +PDIVARTTLIAA S+AG+   AR I  +TPL IRDTV YNAMITGYSHNNDG+
Sbjct: 72  LFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGF 131

Query: 366 NAVKLFSEMRRDQFRPDTFTF 428
            A++LF ++ R+ FRPD FTF
Sbjct: 132 GAIELFRDLLRNGFRPDNFTF 152



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
 Frame = +3

Query: 66  KLARTLHAQMITSGFKPRGHILNRLIDIY---------SKSRDLNSARLLFDAIPEPDIV 218
           K  + +H  ++ SG      +LN L+ ++         S S  + +AR LFD + E D +
Sbjct: 167 KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDEL 226

Query: 219 ARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRR 398
           + TT+IA     G+L  AR  L+    K+   V++NAMI+GY H+     A+++F +M  
Sbjct: 227 SWTTMIAGYVRNGELDAARQFLDGMTEKL--VVAWNAMISGYVHHGFFLEALEMFRKMYL 284

Query: 399 DQFRPDTFTF 428
              + D FT+
Sbjct: 285 LGIQWDEFTY 294



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
 Frame = +3

Query: 18  YASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGH----ILNRLIDIYSKSRDLNSARL 185
           Y S L  C  A    H   + +HA ++ +  +P       + N L  +Y K   ++ AR 
Sbjct: 294 YTSVLSACANAGFFLH--GKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQ 351

Query: 186 LFDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGY 365
           +F+ +P  D+V+   +++   NAG +  A+      P   R+ +++  MI+G + N  G 
Sbjct: 352 VFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE--RNLLTWTVMISGLAQNGFGE 409

Query: 366 NAVKLFSEMRRDQFRPDTFTF 428
            ++KLF+ M+ + F P  + F
Sbjct: 410 ESLKLFNRMKSEGFEPCDYAF 430


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/140 (67%), Positives = 111/140 (79%)
 Frame = +3

Query: 9   ANHYASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGHILNRLIDIYSKSRDLNSARLL 188
           AN Y S LQ+CC  +P S+ LAR +HA MI SGF+PRGHILNRLIDIYSKS  LN AR L
Sbjct: 11  ANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYL 70

Query: 189 FDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYN 368
           FD IP+PDIVARTTLIAA S AGDL  +R I + TPL +RD+V YNAMIT YSHN+DG+ 
Sbjct: 71  FDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHA 130

Query: 369 AVKLFSEMRRDQFRPDTFTF 428
           A++LF +M+RD FRPD +TF
Sbjct: 131 AIELFCDMQRDNFRPDNYTF 150



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
 Frame = +3

Query: 66  KLARTLHAQMITSGFKPRGHILNRLIDIYSK---------SRDLNSARLLFDAIPEPDIV 218
           K  + LH  ++ SG      +LN LI  Y K         S  +  AR LFD +P  D +
Sbjct: 165 KHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDEL 224

Query: 219 ARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRR 398
           + TT+I       DL  A+  LN T  K+   V++NAMI+GY+H      A ++F +M  
Sbjct: 225 SWTTIITGYVKNNDLDAAKEFLNGTSKKLG--VAWNAMISGYAHRGLYLEAFEMFRKMIM 282

Query: 399 DQFRPDTFTF 428
            + + D FTF
Sbjct: 283 SKIQLDEFTF 292


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/140 (65%), Positives = 105/140 (75%)
 Frame = +3

Query: 9   ANHYASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGHILNRLIDIYSKSRDLNSARLL 188
           ANHYAS LQLCCP +P S+  ART+HA MI SGFKP GH LNRLI IY KS  L+ AR L
Sbjct: 15  ANHYASLLQLCCPQSPISYPFARTIHAHMIASGFKPHGHTLNRLIYIYCKSSKLSYARSL 74

Query: 189 FDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYN 368
           FD IP+PDIVARTTLI A S  G L  A+ +   TPL +RD V YNAMIT YSHNNDG+ 
Sbjct: 75  FDEIPQPDIVARTTLINAYSATGHLKLAKEMFYETPLIMRDAVIYNAMITAYSHNNDGHA 134

Query: 369 AVKLFSEMRRDQFRPDTFTF 428
           A++LF +M+R+ FRPD FTF
Sbjct: 135 AIELFCDMKRNDFRPDNFTF 154



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
 Frame = +3

Query: 81  LHAQMITSGFKPRGHILNRLIDIYSK---------SRDLNSARLLFDAIPEPDIVARTTL 233
           LH  ++ SG      +LN LI +Y K         S  + +AR LFD +P  D ++ TT+
Sbjct: 174 LHCTVVKSGTWFVTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTTI 233

Query: 234 IAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRRDQFRP 413
           I       DL  AR + +    K+   V +NAMI+GY H      A+++F +M     + 
Sbjct: 234 ITGYVKNDDLDAAREVFDGMREKL--VVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKL 291

Query: 414 DTFTF 428
           D FT+
Sbjct: 292 DEFTY 296



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
 Frame = +3

Query: 18  YASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGH----ILNRLIDIYSKSRDLNSARL 185
           Y S +  C  A    H   + +HA ++ +   P       + N L+ +Y K   ++ A+ 
Sbjct: 296 YTSIISACANAGFLQH--GKQVHAYILKTEAMPSPDFSLPVNNALVTLYWKCGKVDEAQE 353

Query: 186 LFDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGY 365
           +F+ +P  D+V+  T+++   NAG +  A+      P K  + +S+  MI+G + N  G 
Sbjct: 354 VFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEK--NILSWVVMISGLAQNGFGE 411

Query: 366 NAVKLFSEMRRDQFRPDTFTF 428
             +KLF++M+   F P  + F
Sbjct: 412 EGLKLFNQMKLRGFEPCDYAF 432


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/141 (63%), Positives = 105/141 (74%)
 Frame = +3

Query: 6   LANHYASQLQLCCPATPTSHKLARTLHAQMITSGFKPRGHILNRLIDIYSKSRDLNSARL 185
           LAN Y +QL LCCP   +S+ LART+H  +I SGFK RGHI+NRLIDIY KS D   AR 
Sbjct: 10  LANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARK 69

Query: 186 LFDAIPEPDIVARTTLIAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGY 365
           LFD IP+PD++ARTTLI A S  G+L  AR I N TPL +RDTV YNAMITGYSH NDG+
Sbjct: 70  LFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGH 129

Query: 366 NAVKLFSEMRRDQFRPDTFTF 428
           +A++LF  MR   F+PD FTF
Sbjct: 130 SAIELFRAMRWANFQPDDFTF 150



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
 Frame = +3

Query: 69  LARTLHAQMITSGFKPRGHIL----NRLIDIYSKSRDLNSARLLFDAIPEPDIVARTTLI 236
           L + +HA ++ +   P    L    N LI +Y K   ++ AR +F  +P  DI+   TL+
Sbjct: 307 LGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLL 366

Query: 237 AALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRRDQFRPD 416
           +   NAG +  A+      P K  + +++  MI+G + N  G  A+KLF++M+ D + P+
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPEK--NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424

Query: 417 TFTF 428
            + F
Sbjct: 425 DYAF 428



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
 Frame = +3

Query: 81  LHAQMITSGFKPRGHILNRLIDIY---------SKSRDLNSARLLFDAIPEPDIVARTTL 233
           +H  ++  G +    +LN L+ +Y         S S  + SAR LFD +P+ +    TTL
Sbjct: 170 MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTL 229

Query: 234 IAALSNAGDLIHARHILNSTPLKIRDTVSYNAMITGYSHNNDGYNAVKLFSEMRRDQFRP 413
           I      GDL  AR IL++  +  +  +++NAMI+GY H+    +A+ LF +MR    + 
Sbjct: 230 ITGYVRNGDLTGAREILDT--MTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQV 287

Query: 414 DTFTF 428
           D  T+
Sbjct: 288 DESTY 292