BLASTX nr result

ID: Coptis21_contig00030647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030647
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33727.3| unnamed protein product [Vitis vinifera]               63   1e-13
emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]    63   1e-13
ref|XP_002524975.1| conserved hypothetical protein [Ricinus comm...    61   1e-12
ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|2...    58   6e-12
ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|2...    57   9e-11

>emb|CBI33727.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 63.2 bits (152), Expect(2) = 1e-13
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 298 DENKWSDHNSDGEDEEETLSLCDLPVCVNNEENRQSAAEETKSL-EAEDFAFGSLGGSRL 122
           D+ KW + +SD E+E+E LS CDLP  +  +E+     E  + +   EDF FGS   S L
Sbjct: 33  DDEKWEEFDSD-EEEDEALSFCDLPNDLICKEDNSGKEENPQVVGTGEDFDFGSWNRSLL 91

Query: 121 TESEMCAADQVFF 83
            ES+MCAAD+VFF
Sbjct: 92  AESDMCAADEVFF 104



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -3

Query: 87  FFQGQLLPLRLSVSSEAGLPCTKEESK 7
           FFQGQ+LPLRLSVSS++GL   + +S+
Sbjct: 103 FFQGQILPLRLSVSSDSGLAGYRNDSR 129


>emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]
          Length = 323

 Score = 63.2 bits (152), Expect(2) = 1e-13
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 298 DENKWSDHNSDGEDEEETLSLCDLPVCVNNEENRQSAAEETKSL-EAEDFAFGSLGGSRL 122
           D+ KW + +SD E+E+E LS CDLP  +  +E+     E  + +   EDF FGS   S L
Sbjct: 6   DDEKWEEFDSD-EEEDEALSFCDLPNDLICKEDNSGKEENPQVVGTGEDFDFGSWNRSLL 64

Query: 121 TESEMCAADQVFF 83
            ES+MCAAD+VFF
Sbjct: 65  AESDMCAADEVFF 77



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -3

Query: 87  FFQGQLLPLRLSVSSEAGLPCTKEESK 7
           FFQGQ+LPLRLSVSS++GL   + +S+
Sbjct: 76  FFQGQILPLRLSVSSDSGLAGYRNDSR 102


>ref|XP_002524975.1| conserved hypothetical protein [Ricinus communis]
           gi|223535810|gb|EEF37472.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 381

 Score = 60.8 bits (146), Expect(2) = 1e-12
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = -2

Query: 298 DENKWSDHNSDGEDEEETLSLCDLPVCVNNEENRQSAAEETKSLEA----EDFAFGSLGG 131
           DE+KW +H+   E+EEE LSLCDLPV +  EE +    EE    E     EDF FG    
Sbjct: 6   DEDKW-EHSDSPEEEEEALSLCDLPVNLIEEEIQSRKEEEACRPETEIIQEDFNFG---- 60

Query: 130 SRLTESEMCAADQVFF 83
            +  +SEMCAAD +FF
Sbjct: 61  -KWDDSEMCAADDIFF 75



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
 Frame = -3

Query: 87  FFQGQLLPLRLSVSSEAGL---PCTKEESKN 4
           FF GQ+LP RLSVSSE+G+    C K++S N
Sbjct: 74  FFDGQILPFRLSVSSESGIGPNNCCKQDSLN 104


>ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|222840813|gb|EEE78360.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 58.2 bits (139), Expect(2) = 6e-12
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
 Frame = -2

Query: 295 ENKWS-------DHNSDGEDEEETLSLCDLPVCV----NNEENRQSAAEETKSLEAEDFA 149
           E KW        D     ++EEE+LSLCDLPV +    NN+  R   A +      EDF 
Sbjct: 7   EEKWEHPDRSAQDEEDQDQEEEESLSLCDLPVNMVKGENNQSTRDQEAHKETETNQEDFD 66

Query: 148 FGSL---GGSRLTESEMCAADQVFF 83
           FG      GS   +S+MCAAD +FF
Sbjct: 67  FGPFRGGDGSLSNKSDMCAADDIFF 91



 Score = 37.0 bits (84), Expect(2) = 6e-12
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = -3

Query: 87  FFQGQLLPLRLSVSSEAGLPCTKEES 10
           FFQGQ+LPLRLSVSSE+G+   K ++
Sbjct: 90  FFQGQILPLRLSVSSESGVNKFKNDT 115


>ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|222856743|gb|EEE94290.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 56.6 bits (135), Expect(2) = 9e-11
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
 Frame = -2

Query: 298 DENKWSDHNSDGED--EEETLSLCDLPVCVNNEENRQSA----AEETKSLEAEDFAFGSL 137
           ++ + SD ++  E+  EEE LSLCDLPV    EEN QS+    A +      EDF FG  
Sbjct: 8   EKREHSDFSTQEEEDQEEEALSLCDLPVNRMKEENNQSSRNQEAHQGTETNQEDFDFGPW 67

Query: 136 GGSRL--TESEMCAADQVFF 83
           GG      +S+MCAAD +FF
Sbjct: 68  GGDGYLSKKSDMCAADDIFF 87



 Score = 34.7 bits (78), Expect(2) = 9e-11
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -3

Query: 87  FFQGQLLPLRLSVSSEAGL 31
           FFQGQ+LPLRLS SSE+G+
Sbjct: 86  FFQGQILPLRLSFSSESGV 104


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