BLASTX nr result

ID: Coptis21_contig00030564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030564
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25466.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002272182.1| PREDICTED: uncharacterized protein LOC100250...   119   3e-25
ref|XP_002532114.1| nucleotide binding protein, putative [Ricinu...   114   1e-23
emb|CBI22805.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002263824.1| PREDICTED: uncharacterized protein LOC100257...   112   2e-23

>emb|CBI25466.3| unnamed protein product [Vitis vinifera]
          Length = 1137

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/90 (61%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   GDDCGLMSVLKYNAEEGKIVQLPYHIPANSVAEAAGISITNHQSIVGVLPEPCA-SERVL 177
           GD+ G + VLKY+ +EGK++  PYHIPAN+VAE AGIS+  H SIVGVLP+PC+   R+L
Sbjct: 139 GDEHGSLFVLKYDHQEGKLLHQPYHIPANAVAEVAGISVPIHHSIVGVLPQPCSHGNRML 198

Query: 178 IAYEKGLIILWDVSEARVVCIRGYKDLQLR 267
           IAYE GL+I+WD  +  VVC+RGYKDLQ++
Sbjct: 199 IAYENGLLIVWDAFQDSVVCVRGYKDLQVK 228


>ref|XP_002272182.1| PREDICTED: uncharacterized protein LOC100250143 [Vitis vinifera]
          Length = 1108

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/90 (61%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   GDDCGLMSVLKYNAEEGKIVQLPYHIPANSVAEAAGISITNHQSIVGVLPEPCA-SERVL 177
           GD+ G + VLKY+ +EGK++  PYHIPAN+VAE AGIS+  H SIVGVLP+PC+   R+L
Sbjct: 139 GDEHGSLFVLKYDHQEGKLLHQPYHIPANAVAEVAGISVPIHHSIVGVLPQPCSHGNRML 198

Query: 178 IAYEKGLIILWDVSEARVVCIRGYKDLQLR 267
           IAYE GL+I+WD  +  VVC+RGYKDLQ++
Sbjct: 199 IAYENGLLIVWDAFQDSVVCVRGYKDLQVK 228


>ref|XP_002532114.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223528217|gb|EEF30276.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1096

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/90 (58%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   GDDCGLMSVLKYNAEEGKIVQLPYHIPANSVAEAAGISITNHQSIVGVLPEPCAS-ERVL 177
           GD+ GLMSV+KY+A+  K+++LPY+IP+N + E AG   ++HQ IVG+LP PC+S  RVL
Sbjct: 143 GDEYGLMSVVKYDADNAKLLRLPYNIPSNQLNEVAGFPSSDHQPIVGLLPHPCSSGNRVL 202

Query: 178 IAYEKGLIILWDVSEARVVCIRGYKDLQLR 267
           IAYE GL++LWDVSEAR++ + G KDLQL+
Sbjct: 203 IAYENGLMVLWDVSEARILFVGGSKDLQLK 232


>emb|CBI22805.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/89 (60%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   GDDCGLMSVLKYNAEEGKIVQLPYHIPANSVAEAAGISITNHQSIVGVLPEPCAS-ERVL 177
           GD+ G +SVLK  A++GK++QLPY+I A S++EA G S  NHQ ++GVLP+PC+S  RVL
Sbjct: 152 GDEYGSISVLKCEADDGKLLQLPYNIFAKSISEAGGFSFFNHQPVIGVLPQPCSSGNRVL 211

Query: 178 IAYEKGLIILWDVSEARVVCIRGYKDLQL 264
           IAYE GLIILWDVSEA+++  +G K+LQL
Sbjct: 212 IAYENGLIILWDVSEAQIIVAKGDKNLQL 240


>ref|XP_002263824.1| PREDICTED: uncharacterized protein LOC100257563 [Vitis vinifera]
          Length = 1176

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/89 (60%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   GDDCGLMSVLKYNAEEGKIVQLPYHIPANSVAEAAGISITNHQSIVGVLPEPCAS-ERVL 177
           GD+ G +SVLK  A++GK++QLPY+I A S++EA G S  NHQ ++GVLP+PC+S  RVL
Sbjct: 201 GDEYGSISVLKCEADDGKLLQLPYNIFAKSISEAGGFSFFNHQPVIGVLPQPCSSGNRVL 260

Query: 178 IAYEKGLIILWDVSEARVVCIRGYKDLQL 264
           IAYE GLIILWDVSEA+++  +G K+LQL
Sbjct: 261 IAYENGLIILWDVSEAQIIVAKGDKNLQL 289


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