BLASTX nr result

ID: Coptis21_contig00030532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030532
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like...   223   4e-56
ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like...   223   4e-56
ref|XP_002462022.1| hypothetical protein SORBIDRAFT_02g012660 [S...   217   2e-54
ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arab...   216   4e-54
ref|XP_003572617.1| PREDICTED: tubulin-specific chaperone C-like...   213   4e-53

>ref|XP_003634829.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score =  223 bits (568), Expect = 4e-56
 Identities = 102/143 (71%), Positives = 121/143 (84%)
 Frame = +3

Query: 18  GEFSLSNLISCEIRITGKCRAVFIHKLKSCRVFIGPIMGSIHIEQVEDCLFMLASHQIRI 197
           GEF++S+L SCE+R++G  R +FIH+LK+CRVF GP+ GSI IE+VE C+F+LASHQIRI
Sbjct: 199 GEFTISDLDSCEVRLSGCVRTIFIHRLKNCRVFAGPVSGSILIEEVEGCVFVLASHQIRI 258

Query: 198 HFAKKCDFYLRVRSRPIIEDSNGVRFGPYLLDYDGIEKHLKECSLDEDTGNWENVDDFRW 377
           H+AK  DFYLRVRSRPIIEDSNGVRF PY L Y GIE+ LK+  LDE+TGNW NVDDFRW
Sbjct: 259 HYAKGSDFYLRVRSRPIIEDSNGVRFAPYCLCYQGIEEDLKDSGLDEETGNWANVDDFRW 318

Query: 378 LRAVQSPNWCVIPEEERVGVVNI 446
           LRAVQSPNW  +PE ER+G VNI
Sbjct: 319 LRAVQSPNWSALPENERIGTVNI 341


>ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score =  223 bits (568), Expect = 4e-56
 Identities = 102/143 (71%), Positives = 121/143 (84%)
 Frame = +3

Query: 18  GEFSLSNLISCEIRITGKCRAVFIHKLKSCRVFIGPIMGSIHIEQVEDCLFMLASHQIRI 197
           GEF++S+L SCE+R++G  R +FIH+LK+CRVF GP+ GSI IE+VE C+F+LASHQIRI
Sbjct: 199 GEFTISDLDSCEVRLSGCVRTIFIHRLKNCRVFAGPVSGSILIEEVEGCVFVLASHQIRI 258

Query: 198 HFAKKCDFYLRVRSRPIIEDSNGVRFGPYLLDYDGIEKHLKECSLDEDTGNWENVDDFRW 377
           H+AK  DFYLRVRSRPIIEDSNGVRF PY L Y GIE+ LK+  LDE+TGNW NVDDFRW
Sbjct: 259 HYAKGSDFYLRVRSRPIIEDSNGVRFAPYCLCYQGIEEDLKDSGLDEETGNWANVDDFRW 318

Query: 378 LRAVQSPNWCVIPEEERVGVVNI 446
           LRAVQSPNW  +PE ER+G VNI
Sbjct: 319 LRAVQSPNWSALPENERIGTVNI 341


>ref|XP_002462022.1| hypothetical protein SORBIDRAFT_02g012660 [Sorghum bicolor]
           gi|241925399|gb|EER98543.1| hypothetical protein
           SORBIDRAFT_02g012660 [Sorghum bicolor]
          Length = 345

 Score =  217 bits (553), Expect = 2e-54
 Identities = 92/144 (63%), Positives = 125/144 (86%)
 Frame = +3

Query: 15  DGEFSLSNLISCEIRITGKCRAVFIHKLKSCRVFIGPIMGSIHIEQVEDCLFMLASHQIR 194
           DG+F+L++L+SCE+ + GKCRA++IHKL+ CRVF+G ++GS+ IE V+ C+F++A+HQIR
Sbjct: 192 DGDFTLADLVSCEVYLKGKCRALYIHKLRDCRVFVGAVLGSVLIEDVQGCIFVMAAHQIR 251

Query: 195 IHFAKKCDFYLRVRSRPIIEDSNGVRFGPYLLDYDGIEKHLKECSLDEDTGNWENVDDFR 374
           IH A+  DFYLRVRSRPIIED +GVRF PY+L+Y+GIE+ LK+  L E+TGNW NVDDF+
Sbjct: 252 IHEARVTDFYLRVRSRPIIEDCSGVRFAPYVLNYEGIEEDLKDSGLQEETGNWANVDDFK 311

Query: 375 WLRAVQSPNWCVIPEEERVGVVNI 446
           WL+A+QSPNWC++PEEER+  VNI
Sbjct: 312 WLKAMQSPNWCLVPEEERLQTVNI 335


>ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arabidopsis lyrata subsp.
           lyrata] gi|297312730|gb|EFH43153.1| hypothetical protein
           ARALYDRAFT_912482 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  216 bits (550), Expect = 4e-54
 Identities = 100/147 (68%), Positives = 121/147 (82%)
 Frame = +3

Query: 18  GEFSLSNLISCEIRITGKCRAVFIHKLKSCRVFIGPIMGSIHIEQVEDCLFMLASHQIRI 197
           GEF+LS+L SC++++TG   A+F+H+LK C V+ GP++GSI I+ VEDC+ +LASHQIRI
Sbjct: 200 GEFTLSDLDSCQVKLTGTVNALFLHRLKKCNVYTGPVIGSILIDDVEDCVLVLASHQIRI 259

Query: 198 HFAKKCDFYLRVRSRPIIEDSNGVRFGPYLLDYDGIEKHLKECSLDEDTGNWENVDDFRW 377
           H A+K DFYLRVRSRPIIEDSNGVRF PY LDY GIE+ LK   L+E+T NW NVDDFRW
Sbjct: 260 HCARKSDFYLRVRSRPIIEDSNGVRFAPYCLDYQGIEEDLKTAGLEEETKNWANVDDFRW 319

Query: 378 LRAVQSPNWCVIPEEERVGVVNI*SWG 458
           LRAVQSPNW V+PEEERV +V I S G
Sbjct: 320 LRAVQSPNWSVLPEEERVSLVTISSEG 346


>ref|XP_003572617.1| PREDICTED: tubulin-specific chaperone C-like [Brachypodium
           distachyon]
          Length = 354

 Score =  213 bits (542), Expect = 4e-53
 Identities = 94/144 (65%), Positives = 121/144 (84%)
 Frame = +3

Query: 15  DGEFSLSNLISCEIRITGKCRAVFIHKLKSCRVFIGPIMGSIHIEQVEDCLFMLASHQIR 194
           DG+F+L++L+SCE+ + GKCRA++IHKL+ CR+F+GP+ GS+ IE VE C F++A+HQIR
Sbjct: 201 DGDFTLADLVSCEVYLKGKCRALYIHKLRDCRLFVGPVFGSVLIEDVERCTFVMAAHQIR 260

Query: 195 IHFAKKCDFYLRVRSRPIIEDSNGVRFGPYLLDYDGIEKHLKECSLDEDTGNWENVDDFR 374
           IH A+  DFYLRVRSRPIIED  GVRF P+ L Y+GIEK L++  L+EDTGNW NVDDF+
Sbjct: 261 IHEARATDFYLRVRSRPIIEDCCGVRFAPHALKYEGIEKDLRDSGLEEDTGNWANVDDFK 320

Query: 375 WLRAVQSPNWCVIPEEERVGVVNI 446
           WLRAVQSPNW +IPEEER+  V+I
Sbjct: 321 WLRAVQSPNWSLIPEEERLQTVDI 344


Top