BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030480
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   209   3e-52
emb|CBI34155.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   186   2e-45
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   186   2e-45
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   179   2e-43

>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  209 bits (532), Expect = 3e-52
 Identities = 114/200 (57%), Positives = 149/200 (74%), Gaps = 6/200 (3%)
 Frame = -1

Query: 582  LLSPLRPSGSRGAGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEFGLPHNSG 403
            LLSP RP+GSR + P++RPN       G  + S +A GS S  TTPV Q  E  + +N+G
Sbjct: 814  LLSPPRPTGSRMSIPNSRPN-------GPQVESFKAAGSGSCATTPVSQTLESTVSYNTG 866

Query: 402  FNVL-KHDKAPPKRSISDVLSLVPSLEGVK----VCKRRKLSETALYHAPVSQ-VVSSDV 241
             +V  K+D+   KR+ SD+L+L+PSL+GV+    +CK+RK+S++A     + Q V+S+++
Sbjct: 867  EDVTSKNDRKSGKRTASDMLTLIPSLQGVESNSGICKKRKISDSAGCQLSLPQGVMSAEI 926

Query: 240  IRKMEGYTYGNLLAEANKGNAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEE 61
            I + EGY+YG+L+AEANKGN PS+IYV ALLHV+RHCSLCIKHARLTSQMDALDI YVEE
Sbjct: 927  IPRTEGYSYGSLIAEANKGNVPSSIYVAALLHVVRHCSLCIKHARLTSQMDALDISYVEE 986

Query: 60   VGLRVPSSNLWFRLPFARED 1
            VGLR  SSN+WFRLP AR D
Sbjct: 987  VGLRSGSSNIWFRLPLARGD 1006


>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  200 bits (508), Expect = 2e-49
 Identities = 108/195 (55%), Positives = 140/195 (71%), Gaps = 8/195 (4%)
 Frame = -1

Query: 561  SGSRGAGPSARPNELG--SPPTGNIMGSNRAGGSNSWTTTPVCQVPEFGLPHNSGFNVL- 391
            S S G+G +   + L   S  +   +  +RA GS+SW T+P  Q P+    H S  +V+ 
Sbjct: 715  SSSIGSGTTMDEDHLRLLSDSSKEAVSGSRAAGSSSWVTSPTSQAPDSANFHGSSHDVVS 774

Query: 390  KHDKAPPKRSISDVLSLVPSLEGVKV----CKRRKLSETALYHAPVSQ-VVSSDVIRKME 226
            K D    KRS+SD+L L+PSL+ ++      KRRK+SE+A    P+SQ ++SS++  K E
Sbjct: 775  KQDTHSRKRSVSDMLDLIPSLQNLEANTRFYKRRKISESAHTLQPLSQALISSEIACKTE 834

Query: 225  GYTYGNLLAEANKGNAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEEVGLRV 46
            GY+YGNL+AEANKGNAPS++YV+ALLHV+RHCSLCIKHARLTSQM+ALDIPYVEEVGLR 
Sbjct: 835  GYSYGNLIAEANKGNAPSSVYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRN 894

Query: 45   PSSNLWFRLPFARED 1
             SSNLWFRLPF+  D
Sbjct: 895  ASSNLWFRLPFSSGD 909


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  186 bits (472), Expect = 2e-45
 Identities = 111/200 (55%), Positives = 137/200 (68%), Gaps = 6/200 (3%)
 Frame = -1

Query: 582 LLSPLRPSGSRGAGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEF--GLPHN 409
           LLSP    G R +G S +PN   S PT    GS R  GS S  +TPV Q  +      + 
Sbjct: 322 LLSPTPHGGPRISG-SIKPNGSRSSPTAAPTGSLRPSGSCSSVSTPVSQNQDTCSSPVYE 380

Query: 408 SGFNVLKHDKAPPKRSISDVLSLVPSLEGVK----VCKRRKLSETALYHAPVSQVVSSDV 241
           SG   LK D    KR+ SD+L+L+PSL+G+     + KRRK+SE+A +  P SQ++ S  
Sbjct: 381 SG---LKSD-CSRKRTASDMLNLIPSLKGIDAYNGLSKRRKVSESARFSKPSSQLLISKE 436

Query: 240 IRKMEGYTYGNLLAEANKGNAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEE 61
           +     Y+YGNL+AEANKG APS+ YV+ALLHVIRHCSLCIKHARLTSQMDALDIP+VEE
Sbjct: 437 MVSRTEYSYGNLIAEANKGAAPSSTYVSALLHVIRHCSLCIKHARLTSQMDALDIPFVEE 496

Query: 60  VGLRVPSSNLWFRLPFARED 1
           VGLR  S+N+WFRLPFAR+D
Sbjct: 497 VGLRNASTNIWFRLPFARDD 516


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like [Cucumis sativus]
          Length = 1800

 Score =  186 bits (472), Expect = 2e-45
 Identities = 111/200 (55%), Positives = 137/200 (68%), Gaps = 6/200 (3%)
 Frame = -1

Query: 582  LLSPLRPSGSRGAGPSARPNELGSPPTGNIMGSNRAGGSNSWTTTPVCQVPEF--GLPHN 409
            LLSP    G R +G S +PN   S PT    GS R  GS S  +TPV Q  +      + 
Sbjct: 791  LLSPTPHGGPRISG-SIKPNGSRSSPTAAPTGSLRPSGSCSSVSTPVSQNQDTCSSPVYE 849

Query: 408  SGFNVLKHDKAPPKRSISDVLSLVPSLEGVK----VCKRRKLSETALYHAPVSQVVSSDV 241
            SG   LK D    KR+ SD+L+L+PSL+G+     + KRRK+SE+A +  P SQ++ S  
Sbjct: 850  SG---LKSD-CSRKRTASDMLNLIPSLKGIDAYNGLSKRRKVSESARFSKPSSQLLISKE 905

Query: 240  IRKMEGYTYGNLLAEANKGNAPSNIYVTALLHVIRHCSLCIKHARLTSQMDALDIPYVEE 61
            +     Y+YGNL+AEANKG APS+ YV+ALLHVIRHCSLCIKHARLTSQMDALDIP+VEE
Sbjct: 906  MVSRTEYSYGNLIAEANKGAAPSSTYVSALLHVIRHCSLCIKHARLTSQMDALDIPFVEE 965

Query: 60   VGLRVPSSNLWFRLPFARED 1
            VGLR  S+N+WFRLPFAR+D
Sbjct: 966  VGLRNASTNIWFRLPFARDD 985


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/152 (61%), Positives = 118/152 (77%), Gaps = 6/152 (3%)
 Frame = -1

Query: 438  QVPEFGLPHNSGFNVL-KHDKAPPKRSISDVLSLVPSLEGVKV----CKRRKLSETALYH 274
            Q P+    H S  +V+ K D    KRS+SD+L L+PSL+ ++      KRRK+SE+A   
Sbjct: 792  QAPDSANFHGSSHDVVSKQDTHSRKRSVSDMLDLIPSLQNLEANTRFYKRRKISESAHTL 851

Query: 273  APVSQ-VVSSDVIRKMEGYTYGNLLAEANKGNAPSNIYVTALLHVIRHCSLCIKHARLTS 97
             P+SQ ++SS++  K EGY+YGNL+AEANKGNAPS++YV+ALLHV+RHCSLCIKHARLTS
Sbjct: 852  QPLSQALISSEIACKTEGYSYGNLIAEANKGNAPSSVYVSALLHVVRHCSLCIKHARLTS 911

Query: 96   QMDALDIPYVEEVGLRVPSSNLWFRLPFARED 1
            QM+ALDIPYVEEVGLR  SSNLWFRLPF+  D
Sbjct: 912  QMEALDIPYVEEVGLRNASSNLWFRLPFSSGD 943