BLASTX nr result

ID: Coptis21_contig00030476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030476
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139794.1| PREDICTED: prohibitin-2-like isoform 1 [Cucu...    80   2e-13
ref|NP_001241227.1| uncharacterized protein LOC100811958 [Glycin...    78   9e-13
ref|XP_002268891.2| PREDICTED: prohibitin-2 [Vitis vinifera]           77   1e-12
emb|CBI38733.3| unnamed protein product [Vitis vinifera]               77   1e-12
emb|CAN66748.1| hypothetical protein VITISV_005691 [Vitis vinifera]    77   1e-12

>ref|XP_004139794.1| PREDICTED: prohibitin-2-like isoform 1 [Cucumis sativus]
           gi|449444064|ref|XP_004139795.1| PREDICTED:
           prohibitin-2-like isoform 2 [Cucumis sativus]
           gi|449444066|ref|XP_004139796.1| PREDICTED:
           prohibitin-2-like isoform 3 [Cucumis sativus]
           gi|449507448|ref|XP_004163035.1| PREDICTED:
           prohibitin-2-like isoform 1 [Cucumis sativus]
           gi|449507452|ref|XP_004163036.1| PREDICTED:
           prohibitin-2-like isoform 2 [Cucumis sativus]
           gi|449507457|ref|XP_004163037.1| PREDICTED:
           prohibitin-2-like isoform 3 [Cucumis sativus]
          Length = 290

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/68 (61%), Positives = 47/68 (69%)
 Frame = +3

Query: 6   IRAQGEAKSAQLIGQAISNNPAFXXXXXXXXXXXXXXXXXNSKNRVFLNSDDLLLNLQEM 185
           IRAQGEAKS QLIGQA++NNPAF                 NS N+VFLNSDDLLLNLQEM
Sbjct: 223 IRAQGEAKSGQLIGQAVANNPAFMTLRKIEAAREIAHTIANSANKVFLNSDDLLLNLQEM 282

Query: 186 TLEAPGKE 209
           +LE  GK+
Sbjct: 283 SLEPSGKK 290


>ref|NP_001241227.1| uncharacterized protein LOC100811958 [Glycine max]
           gi|255637310|gb|ACU18985.1| unknown [Glycine max]
          Length = 289

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/67 (61%), Positives = 46/67 (68%)
 Frame = +3

Query: 6   IRAQGEAKSAQLIGQAISNNPAFXXXXXXXXXXXXXXXXXNSKNRVFLNSDDLLLNLQEM 185
           IRAQGEAKSAQLIG+AI+NNPAF                 NS N+V+LNSDDLLLNLQE+
Sbjct: 222 IRAQGEAKSAQLIGEAIANNPAFITLRKIEAAREIAHTISNSANKVYLNSDDLLLNLQEL 281

Query: 186 TLEAPGK 206
            LE  GK
Sbjct: 282 NLEPSGK 288


>ref|XP_002268891.2| PREDICTED: prohibitin-2 [Vitis vinifera]
          Length = 265

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/64 (65%), Positives = 45/64 (70%)
 Frame = +3

Query: 6   IRAQGEAKSAQLIGQAISNNPAFXXXXXXXXXXXXXXXXXNSKNRVFLNSDDLLLNLQEM 185
           IRAQGEAKSAQLIGQAI+NNPAF                 NS NRVFLNS+DLLLNLQEM
Sbjct: 197 IRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANRVFLNSNDLLLNLQEM 256

Query: 186 TLEA 197
            LE+
Sbjct: 257 NLES 260


>emb|CBI38733.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/64 (65%), Positives = 45/64 (70%)
 Frame = +3

Query: 6   IRAQGEAKSAQLIGQAISNNPAFXXXXXXXXXXXXXXXXXNSKNRVFLNSDDLLLNLQEM 185
           IRAQGEAKSAQLIGQAI+NNPAF                 NS NRVFLNS+DLLLNLQEM
Sbjct: 295 IRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANRVFLNSNDLLLNLQEM 354

Query: 186 TLEA 197
            LE+
Sbjct: 355 NLES 358


>emb|CAN66748.1| hypothetical protein VITISV_005691 [Vitis vinifera]
          Length = 291

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/64 (65%), Positives = 45/64 (70%)
 Frame = +3

Query: 6   IRAQGEAKSAQLIGQAISNNPAFXXXXXXXXXXXXXXXXXNSKNRVFLNSDDLLLNLQEM 185
           IRAQGEAKSAQLIGQAI+NNPAF                 NS NRVFLNS+DLLLNLQEM
Sbjct: 223 IRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANRVFLNSNDLLLNLQEM 282

Query: 186 TLEA 197
            LE+
Sbjct: 283 NLES 286


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