BLASTX nr result

ID: Coptis21_contig00030465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030465
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20229.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002318167.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265...   142   5e-32
ref|XP_003541828.1| PREDICTED: uncharacterized protein LOC100800...   139   5e-31
ref|XP_002518385.1| conserved hypothetical protein [Ricinus comm...   137   1e-30

>emb|CBI20229.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  155 bits (393), Expect = 4e-36
 Identities = 80/153 (52%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
 Frame = +3

Query: 18  GDYGLVSLLEMIALHLDATTSATCSVWAELASCFIKLSHCDEDQISVCGSANEGVDN-RC 194
           GDY   SLLEMIALHLDAT  A   +W E A CF+KLS C+ED++SVC   NEG    + 
Sbjct: 494 GDYDAASLLEMIALHLDATY-AEFDIWREFALCFLKLSQCEEDRMSVCLDGNEGKHKPKY 552

Query: 195 STSSNMIPITFIHGHSRKSWNFRCRWWSKRHFSKSAHVSEMEAGDWELLTSKAACASHLY 374
           +   N IP  FI G S K+W FRCRWW  RHF K+   SE+ AG  ELLT KAACA H+Y
Sbjct: 553 AVRFNRIPNIFIEGKSGKTWRFRCRWWLTRHFGKNIINSEVAAGKLELLTYKAACALHMY 612

Query: 375 GPEFEYVVTVHTSLLKAQKQENIMSLELHMKNS 473
           G  FEYVV  +  L K + ++ ++ L++HM  S
Sbjct: 613 GQGFEYVVGAYNCLDKEKNRDMLLFLQMHMHTS 645


>ref|XP_002318167.1| predicted protein [Populus trichocarpa] gi|222858840|gb|EEE96387.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  153 bits (386), Expect = 3e-35
 Identities = 81/160 (50%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
 Frame = +3

Query: 18  GDYGLVSLLEMIALHLDATTSATCSVWAELASCFIKLSHCDEDQISVCGSANEGVDNRC- 194
           GDY   SLLEMIALHLDA        W E A CF K+S  +ED++SVC   NEG   +  
Sbjct: 424 GDYSPQSLLEMIALHLDAVF-VEYDTWREFALCFFKVSLSEEDEMSVCQHGNEGEKRQSY 482

Query: 195 STSSNMIPITFIHGHSRKSWNFRCRWWSKRHFSKSAHVSEMEAGDWELLTSKAACASHLY 374
           S   N IP  F  G S   W  RCRWWS RHFSKS   SE++AGDW+LLT KAACASH+Y
Sbjct: 483 SVCYNGIPKMFTQGKSVGLWRSRCRWWSTRHFSKSILASEIDAGDWQLLTYKAACASHMY 542

Query: 375 GPEFEYVVTVHTSLLKAQKQENIMSLELHMKNSVKVSEQL 494
           G +F YV   +T + K   ++  M L  HM+NS+ +  QL
Sbjct: 543 GQDFGYVAKAYTCIQKENNRDLSMFLRQHMQNSLGLYSQL 582


>ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
          Length = 715

 Score =  142 bits (358), Expect = 5e-32
 Identities = 73/127 (57%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = +3

Query: 18  GDYGLVSLLEMIALHLDATTSATCSVWAELASCFIKLSHCDEDQISVCGSANEGVDN-RC 194
           GDY   SLLEMIALHLDAT  A   +W E A CF+KLS C+ED++SVC   NEG    + 
Sbjct: 371 GDYDAASLLEMIALHLDATY-AEFDIWREFALCFLKLSQCEEDRMSVCLDGNEGKHKPKY 429

Query: 195 STSSNMIPITFIHGHSRKSWNFRCRWWSKRHFSKSAHVSEMEAGDWELLTSKAACASHLY 374
           +   N IP  FI G S K+W FRCRWW  RHF K+   SE+ AG  ELLT KAACA H+Y
Sbjct: 430 AVRFNRIPNIFIEGKSGKTWRFRCRWWLTRHFGKNIINSEVAAGKLELLTYKAACALHMY 489

Query: 375 GPEFEYV 395
           G  FEYV
Sbjct: 490 GQGFEYV 496


>ref|XP_003541828.1| PREDICTED: uncharacterized protein LOC100800114 [Glycine max]
          Length = 619

 Score =  139 bits (349), Expect = 5e-31
 Identities = 76/152 (50%), Positives = 95/152 (62%)
 Frame = +3

Query: 18  GDYGLVSLLEMIALHLDATTSATCSVWAELASCFIKLSHCDEDQISVCGSANEGVDNRCS 197
           GDY L SLLEMIALHLDAT  A  + W   +SCF++LS  +ED +S C   NE   ++  
Sbjct: 455 GDYSLESLLEMIALHLDAT-HAEYNTWKVFSSCFLRLSSYEEDCMSSCPVQNED-GHKQH 512

Query: 198 TSSNMIPITFIHGHSRKSWNFRCRWWSKRHFSKSAHVSEMEAGDWELLTSKAACASHLYG 377
            S N  P  F  G S KSW  RCRWW  RHFS S   SE+EAGD +LLT KAACAS++YG
Sbjct: 513 FSLNKTPKIFTDGISGKSWRLRCRWWLTRHFSNSKLESEIEAGDLQLLTYKAACASYMYG 572

Query: 378 PEFEYVVTVHTSLLKAQKQENIMSLELHMKNS 473
            EF YV   ++ L +   +E ++ L+ H  NS
Sbjct: 573 REFSYVAKAYSHLEQENDKELLLFLDEHRGNS 604


>ref|XP_002518385.1| conserved hypothetical protein [Ricinus communis]
           gi|223542480|gb|EEF44021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 638

 Score =  137 bits (346), Expect = 1e-30
 Identities = 73/157 (46%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
 Frame = +3

Query: 18  GDYGLVSLLEMIALHLDATTSATCSVWAELASCFIKLSHCDEDQISVCGSANEGVDNR-C 194
           G+Y   SLLEMIALHL+A       +W E A CF+++S  +ED +S C   +EG   +  
Sbjct: 475 GNYSPESLLEMIALHLEAVFGEY-KIWKEFALCFLQVSQYEEDCMSACLYGDEGKKIQGY 533

Query: 195 STSSNMIPITFIHGHSRKSWNFRCRWWSKRHFSKSAHVSEMEAGDWELLTSKAACASHLY 374
           S   N IP  FI G S  +W FRCRWW  RHFSK   VSE+ AG+ E L  KAACA+H+Y
Sbjct: 534 SVRYNRIPKLFICGRSGINWRFRCRWWLTRHFSKKLLVSEIAAGNLEFLAYKAACAAHMY 593

Query: 375 GPEFEYVVTVHTSLLKAQKQENIMSLELHMKNSVKVS 485
           G EF+Y V  +T L K   +   M L+LHM+N + ++
Sbjct: 594 GTEFDYFVKAYTFLEKENNRSLFMFLQLHMQNHIGIN 630


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