BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030441
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   163   1e-38
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   161   6e-38
ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/123 (64%), Positives = 109/123 (88%), Gaps = 2/123 (1%)
 Frame = +2

Query: 65  RLKPISTHRK--FSSILNPDSKTPLTTKQKTRTALTLLKTEKNPEKILDICRAASLTPEN 238
           RL+PIS+HR   FSSIL+PDS TPL++K+K+R AL+LLK+E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 239 HLDRVAFSLAISNLKETQSFELIRRFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDNAKR 418
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM+++A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 419 TFK 427
           TF+
Sbjct: 126 TFE 128


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/123 (64%), Positives = 109/123 (88%), Gaps = 2/123 (1%)
 Frame = +2

Query: 65  RLKPISTHRK--FSSILNPDSKTPLTTKQKTRTALTLLKTEKNPEKILDICRAASLTPEN 238
           RL+PIS+HR   FSSIL+PDS TPL++K+K+R AL+LLK+E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 239 HLDRVAFSLAISNLKETQSFELIRRFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDNAKR 418
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM+++A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 419 TFK 427
           TF+
Sbjct: 126 TFE 128


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = +2

Query: 86  HRKFSSILNPDSKTPLTTKQKTRTALTLLKTEKNPEKILDICRAASLTPENHLDRVAFSL 265
           +R  S+IL+PDS  PL+ KQK+R AL+LLKTE+NPE+I+DICRAASLTPE HLDR+AFS+
Sbjct: 24  YRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSV 83

Query: 266 AISNLKETQSFELIRRFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDNAKRTFK 427
           AIS L + + F+ IRRFLEELK+RPDLKN+RF  H+IVLYGQA M+D+A RTFK
Sbjct: 84  AISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFK 137


>ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g61870, mitochondrial-like [Vitis vinifera]
          Length = 336

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/123 (63%), Positives = 108/123 (87%), Gaps = 2/123 (1%)
 Frame = +2

Query: 65  RLKPISTHRK--FSSILNPDSKTPLTTKQKTRTALTLLKTEKNPEKILDICRAASLTPEN 238
           RL+PI +HR   FSSIL+PDS TPL++K+K+R AL+LLK+E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPIYSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 239 HLDRVAFSLAISNLKETQSFELIRRFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDNAKR 418
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM+++A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 419 TFK 427
           TF+
Sbjct: 126 TFE 128


>ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Glycine max]
          Length = 388

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/127 (62%), Positives = 102/127 (80%)
 Frame = +2

Query: 44  MSLFSRLRLKPISTHRKFSSILNPDSKTPLTTKQKTRTALTLLKTEKNPEKILDICRAAS 223
           MS+FSRLR      H   +SIL+P+S TPLT+KQKTR+A+ LLK+E NPE+ILDICRAA+
Sbjct: 1   MSIFSRLR------HYSTTSILSPNSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAA 54

Query: 224 LTPENHLDRVAFSLAISNLKETQSFELIRRFLEELKTRPDLKNDRFYSHSIVLYGQAGMI 403
           LTP++H+DR AFSLA+S L     F  IR FL++LKTRPDL+N++F SH+IVLYGQA M+
Sbjct: 55  LTPDSHIDRRAFSLAVSKLAAAHHFAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANML 114

Query: 404 DNAKRTF 424
           D+A RTF
Sbjct: 115 DHAIRTF 121