BLASTX nr result

ID: Coptis21_contig00030410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030410
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putati...   159   2e-37
ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   152   3e-35
emb|CBI32004.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine...   146   2e-33

>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/146 (54%), Positives = 101/146 (69%)
 Frame = +3

Query: 3   SLVSLGIWGPLPAKINRFSSLQVLNFTSNSIYGKIPAEVTSMANLQNLVLADNXXXXXXX 182
           SLVSLG+WGPLP KINRF SLQ LN + N I+G+IP ++ S+ NL +LVLA N       
Sbjct: 123 SLVSLGLWGPLPTKINRFWSLQALNISYNFIHGQIPQDILSLKNLTSLVLAHNLLNGTVP 182

Query: 183 XXXXXXXXXXXXXXXNHLGPEFPSLGNKLVTVVLRNNAFNSQIPSKLRNFNQLQHLDISS 362
                          NHLGP FPSLGN LVT++L+NN+  S IPS+++ FNQLQ LDISS
Sbjct: 183 DLRSLVLLQELNLGGNHLGPTFPSLGNNLVTIILKNNSLRSVIPSEIKKFNQLQQLDISS 242

Query: 363 NQFVGPIPSTLFSLPSIHYINLAVNR 440
           N+ +GPIP  LFSLPS+ Y++LA N+
Sbjct: 243 NKLIGPIPPALFSLPSLQYLDLAQNQ 268


>ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223540615|gb|EEF42178.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 749

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/146 (54%), Positives = 102/146 (69%)
 Frame = +3

Query: 3   SLVSLGIWGPLPAKINRFSSLQVLNFTSNSIYGKIPAEVTSMANLQNLVLADNXXXXXXX 182
           SLVSLG+WGP PAKINR  SL+VLN +SN IYG IP +V S+ NL +LVL+DN       
Sbjct: 130 SLVSLGLWGPFPAKINRLWSLEVLNVSSNFIYGAIPQQVVSLKNLSSLVLSDNLLKGPVP 189

Query: 183 XXXXXXXXXXXXXXXNHLGPEFPSLGNKLVTVVLRNNAFNSQIPSKLRNFNQLQHLDISS 362
                          N+LGP FPS+   +VTV+L NN+  S IPS+++NFNQLQ LDISS
Sbjct: 190 DLKSLALLQELDLGGNNLGPNFPSISKSVVTVILGNNSLRSIIPSEIKNFNQLQQLDISS 249

Query: 363 NQFVGPIPSTLFSLPSIHYINLAVNR 440
           N+ +GP+PS+LFSLPSI +++LA N+
Sbjct: 250 NKLIGPVPSSLFSLPSIQFLDLAQNQ 275


>ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At1g14390 [Vitis
           vinifera]
          Length = 746

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/146 (52%), Positives = 100/146 (68%)
 Frame = +3

Query: 3   SLVSLGIWGPLPAKINRFSSLQVLNFTSNSIYGKIPAEVTSMANLQNLVLADNXXXXXXX 182
           SLVSLG+WG LP K+NRF +L+VLN +SN IYG++P  +++  +L+++VLADN       
Sbjct: 120 SLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLADNLLNGSVP 179

Query: 183 XXXXXXXXXXXXXXXNHLGPEFPSLGNKLVTVVLRNNAFNSQIPSKLRNFNQLQHLDISS 362
                          N  GPEFPSLG  LV+VVL+NN+  S IP  L NF++LQ  DISS
Sbjct: 180 DLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFDRLQQFDISS 239

Query: 363 NQFVGPIPSTLFSLPSIHYINLAVNR 440
           N+FVGPIPS++F LPSI Y+NLA N+
Sbjct: 240 NKFVGPIPSSIFYLPSIQYLNLAKNQ 265


>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/146 (52%), Positives = 100/146 (68%)
 Frame = +3

Query: 3   SLVSLGIWGPLPAKINRFSSLQVLNFTSNSIYGKIPAEVTSMANLQNLVLADNXXXXXXX 182
           SLVSLG+WG LP K+NRF +L+VLN +SN IYG++P  +++  +L+++VLADN       
Sbjct: 106 SLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLADNLLNGSVP 165

Query: 183 XXXXXXXXXXXXXXXNHLGPEFPSLGNKLVTVVLRNNAFNSQIPSKLRNFNQLQHLDISS 362
                          N  GPEFPSLG  LV+VVL+NN+  S IP  L NF++LQ  DISS
Sbjct: 166 DLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFDRLQQFDISS 225

Query: 363 NQFVGPIPSTLFSLPSIHYINLAVNR 440
           N+FVGPIPS++F LPSI Y+NLA N+
Sbjct: 226 NKFVGPIPSSIFYLPSIQYLNLAKNQ 251


>ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Cucumis sativus]
           gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g14390-like [Cucumis sativus]
          Length = 728

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/146 (48%), Positives = 98/146 (67%)
 Frame = +3

Query: 3   SLVSLGIWGPLPAKINRFSSLQVLNFTSNSIYGKIPAEVTSMANLQNLVLADNXXXXXXX 182
           SLVSLG+WGP P+K+NRFSSL+VLN +SN IYG IP  ++ + +L++LVLADN       
Sbjct: 129 SLVSLGLWGPFPSKVNRFSSLEVLNISSNFIYGGIPTTISKLQSLKSLVLADNLLNGSVP 188

Query: 183 XXXXXXXXXXXXXXXNHLGPEFPSLGNKLVTVVLRNNAFNSQIPSKLRNFNQLQHLDISS 362
                          N LG + PSLG  L+ V+LR N F S+IPS++   N+LQ  DIS 
Sbjct: 189 DLRGLAVLEELNLGQNQLGQKVPSLGENLMIVILRKNLFRSEIPSRILQLNKLQLFDISY 248

Query: 363 NQFVGPIPSTLFSLPSIHYINLAVNR 440
           N+F+GP+ ++LFSLP++ Y+NLA N+
Sbjct: 249 NKFLGPVHASLFSLPAVQYLNLAYNQ 274