BLASTX nr result

ID: Coptis21_contig00030409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030409
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...   304   1e-80
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77
ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...   294   1e-77
ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-...   293   2e-77
ref|XP_003527169.1| PREDICTED: probable GMP synthase [glutamine-...   291   1e-76

>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  304 bits (779), Expect = 1e-80
 Identities = 168/286 (58%), Positives = 193/286 (67%), Gaps = 35/286 (12%)
 Frame = -3

Query: 754 IRSEPMSEAEARSVLGPAGNKSRS--ASRKATSN------KSDVDITTTNKKRTLK---- 611
           +RS  ++++EARSVLGP GN      ++RK  S       KS  ++    +K+TL     
Sbjct: 7   VRSMNVADSEARSVLGPTGNNKAGPLSARKPVSKQSRKVEKSPEEVKLGEEKKTLTVPAV 66

Query: 610 ----------KVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTS----TR 494
                      + SVLRR E       SLNASCSSD STDS  SR STGRL  S    TR
Sbjct: 67  GTLSPKSHSLNISSVLRRHELLLHSNLSLNASCSSDASTDSFHSRASTGRLTRSNSAGTR 126

Query: 493 RKQ--CXXXXXXXXXXXXXXXXXXSLYTKKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKK 320
           RKQ                        +KK C WVTPNT+PCYA FHDEEWGVP+HDD+K
Sbjct: 127 RKQYVLRPRSFVSEGGLESPPSPDDSQSKKSCAWVTPNTDPCYATFHDEEWGVPIHDDRK 186

Query: 319 LFELLVFSGALAEQTWPTILMKKHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDV 140
           LFELLV SGALAE TWP IL K+HIFREVFADFDP+AVSKFNEKKILAPGSTA SLLS++
Sbjct: 187 LFELLVLSGALAELTWPAILSKRHIFREVFADFDPIAVSKFNEKKILAPGSTATSLLSEL 246

Query: 139 KLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVP 2
           KLRAI+ENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVP
Sbjct: 247 KLRAIVENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVP 292


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  295 bits (754), Expect = 1e-77
 Identities = 167/288 (57%), Positives = 192/288 (66%), Gaps = 37/288 (12%)
 Frame = -3

Query: 754 IRSEPMSEAEARSVLGPAGNKSR---SASRKATSN------KSDVDITTTNKKRTLKKVP 602
           +RS  ++++EAR VLGP GN      +++RK  S       KS  +     +K+ L  VP
Sbjct: 7   VRSMNVADSEARPVLGPTGNTKAGPLTSARKPASKQLRKDGKSPEEAKLGEEKKVLT-VP 65

Query: 601 ---------------SVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTS---- 500
                          SVLRR E       SLNASCSSD STDS  SR STGRL  S    
Sbjct: 66  TVGNLSPKSLSGNFSSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLIRSNNVG 125

Query: 499 TRRKQ--CXXXXXXXXXXXXXXXXXXSLYTKKRCPWVTPNTEPCYAAFHDEEWGVPVHDD 326
           TRRKQ                        +KK C WVTPNT+PCY AFHDEEWG+PVHDD
Sbjct: 126 TRRKQYVSKPRSVVSDGGLESLPSSDGSQSKKSCAWVTPNTDPCYTAFHDEEWGLPVHDD 185

Query: 325 KKLFELLVFSGALAEQTWPTILMKKHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLS 146
           +KLFELLV SGALAE TWP IL K+H+FREVFADFDP+AVSKFNEKKI+APGSTA SLLS
Sbjct: 186 RKLFELLVLSGALAELTWPAILSKRHMFREVFADFDPIAVSKFNEKKIIAPGSTAASLLS 245

Query: 145 DVKLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVP 2
           ++KLRAIIENARQI K++DEFGSFDKYIWSFVNYKPIV++FRY RQVP
Sbjct: 246 ELKLRAIIENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVP 293


>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 380

 Score =  294 bits (753), Expect = 1e-77
 Identities = 165/286 (57%), Positives = 187/286 (65%), Gaps = 35/286 (12%)
 Frame = -3

Query: 754 IRSEPMSEAEARSVLGPAGN-KSRSASRKATSNKSDVDITTT------------------ 632
           +RS  ++++E R VLGP GN K+ S S K  ++K    + T+                  
Sbjct: 7   VRSMNVADSETRPVLGPTGNNKAGSLSAKKPASKQLRKVETSPEAVKLGQEKKLVTVPTA 66

Query: 631 ---NKKRTLKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTS----TR 494
              + K     VPSVLRR E       SLNASCSSD STDS  SR STGRL  S    TR
Sbjct: 67  SALSPKSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLTRSNSLGTR 126

Query: 493 RKQ--CXXXXXXXXXXXXXXXXXXSLYTKKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKK 320
           RKQ                         KK C WVTPN +PCY AFHDEEWG+PVHDDKK
Sbjct: 127 RKQYALKPRSVVSDGGLESPPPSDGSQAKKSCAWVTPNADPCYTAFHDEEWGIPVHDDKK 186

Query: 319 LFELLVFSGALAEQTWPTILMKKHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDV 140
           LFELLV SGALAE TWP IL K+HIFREVFA+FDPV VSKFNEKKI+APGSTA+SLLS++
Sbjct: 187 LFELLVLSGALAELTWPAILSKRHIFREVFANFDPVVVSKFNEKKIIAPGSTASSLLSEI 246

Query: 139 KLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVP 2
           KLRAIIENARQI K+ DE GSFDKYIWSFVNYKPIV++FRY RQVP
Sbjct: 247 KLRAIIENARQISKVTDELGSFDKYIWSFVNYKPIVSRFRYPRQVP 292


>ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 373

 Score =  293 bits (751), Expect = 2e-77
 Identities = 161/278 (57%), Positives = 189/278 (67%), Gaps = 27/278 (9%)
 Frame = -3

Query: 754 IRSEPMSEAEA-RSVLGPAGNKSRSASRKATSNK-----SDVDITTTNKKRTLKKVP--- 602
           +RS  + ++EA R V GPAGNK+ S S + T++K       +      KK++ +      
Sbjct: 6   LRSMNVGDSEAARPVFGPAGNKTGSLSSRKTASKPLRKAEKLYNEAKEKKKSYEMSSVVA 65

Query: 601 -------SVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTSTR----RKQCXX 476
                  SVLRR E       SLNASCSSD STDS  SR STGRL  S      RK+   
Sbjct: 66  SPQSHSASVLRRHEQLLHCNLSLNASCSSDASTDSFHSRASTGRLTRSNSLGCTRKRSVS 125

Query: 475 XXXXXXXXXXXXXXXXSLYTKKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKKLFELLVFS 296
                              +KKRC W+TPNTEPCYA FHDEEWGVPVHDDKKLFELLV S
Sbjct: 126 KPRSVASDGVLESPPHGSQSKKRCAWITPNTEPCYATFHDEEWGVPVHDDKKLFELLVLS 185

Query: 295 GALAEQTWPTILMKKHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDVKLRAIIEN 116
            AL+E +WP IL K+HIFREVF DFDPVAVSKFNEKKI+APGSTA+SLLSD+KLRAIIEN
Sbjct: 186 SALSELSWPAILSKRHIFREVFVDFDPVAVSKFNEKKIMAPGSTASSLLSDLKLRAIIEN 245

Query: 115 ARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVP 2
           ARQI K+++EFGSFDKYIWSFVN+KPI+++FRY RQVP
Sbjct: 246 ARQISKVIEEFGSFDKYIWSFVNHKPIISRFRYPRQVP 283


>ref|XP_003527169.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 383

 Score =  291 bits (744), Expect = 1e-76
 Identities = 160/286 (55%), Positives = 187/286 (65%), Gaps = 35/286 (12%)
 Frame = -3

Query: 754 IRSEPMSEAEARSVLGPAGNKSRSASRKATSNK---SDVD-------------------- 644
           +RS  ++++EAR VLGPAGNK+ S S + T++K     VD                    
Sbjct: 7   LRSMNVADSEARPVLGPAGNKTGSLSSRKTASKPLRKKVDKLLDEIASVKEKKPHQVLLS 66

Query: 643 -ITTTNKKRTLKKVPSVLRRQE-------SLNASCSSDVSTDSLQSRGSTGRLFTS---- 500
            + T++ +     V  +L R E       SLNASCSSD STDS  SR STGRL  S    
Sbjct: 67  SVATSSPQSHSASVSLLLPRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLTRSYSLG 126

Query: 499 TRRKQCXXXXXXXXXXXXXXXXXXSLYTKKRCPWVTPNTEPCYAAFHDEEWGVPVHDDKK 320
           +RRK                       + KRC WVTPNTEPCYA FHDEEWGVPVHDDKK
Sbjct: 127 SRRKPYVSKPRSVASDGVLESPTDGSQSNKRCAWVTPNTEPCYATFHDEEWGVPVHDDKK 186

Query: 319 LFELLVFSGALAEQTWPTILMKKHIFREVFADFDPVAVSKFNEKKILAPGSTANSLLSDV 140
           LFELLV S  LAE TWP IL K+HIFREVF DF+PVAVSK NEKKI+ PG+ A+SLLS+V
Sbjct: 187 LFELLVLSSVLAEHTWPAILSKRHIFREVFVDFEPVAVSKLNEKKIMTPGTIASSLLSEV 246

Query: 139 KLRAIIENARQIVKIVDEFGSFDKYIWSFVNYKPIVNKFRYARQVP 2
           KLRAIIENARQI K++DEFGSFDKYIWSFVN+KPIV++FRY RQVP
Sbjct: 247 KLRAIIENARQISKVIDEFGSFDKYIWSFVNHKPIVSRFRYPRQVP 292


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