BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030390
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   138   4e-31
emb|CBI23877.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   134   6e-30
gb|AFK37698.1| unknown [Lotus japonicus]                              130   8e-29
ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloro...   130   1e-28

>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/117 (64%), Positives = 86/117 (73%)
 Frame = +2

Query: 152 MALTTVPALLHLKTSLLFQTHSNPFPFTPLPLNYTRLSYKPLVVVQARANTRKESAKVRN 331
           MA   V  LL LKTS+ F   S PF F  L   +  +  KPL + QAR N++ ESAKVRN
Sbjct: 18  MAFQNVSGLL-LKTSMPFGLQSKPFDFRSLKTKHCDV--KPLTI-QARGNSKTESAKVRN 73

Query: 332 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTI 502
           RR+ KK+NG+  RPRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQKS+R  PSC+TI
Sbjct: 74  RRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTI 130


>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/117 (59%), Positives = 83/117 (70%)
 Frame = +2

Query: 152 MALTTVPALLHLKTSLLFQTHSNPFPFTPLPLNYTRLSYKPLVVVQARANTRKESAKVRN 331
           M   T P L   K+S LF THSN   F  +P+     S+   +V++ARAN +K+SAK+RN
Sbjct: 1   MTPVTAPTL-QFKSSGLFGTHSNSISFLSMPITN---SFTKAMVIEARANAKKDSAKIRN 56

Query: 332 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTI 502
           RRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  CS I
Sbjct: 57  RRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAI 113


>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/117 (59%), Positives = 83/117 (70%)
 Frame = +2

Query: 152 MALTTVPALLHLKTSLLFQTHSNPFPFTPLPLNYTRLSYKPLVVVQARANTRKESAKVRN 331
           M   T P L   K+S LF THSN   F  +P+     S+   +V++ARAN +K+SAK+RN
Sbjct: 14  MTPVTAPTL-QFKSSGLFGTHSNSISFLSMPITN---SFTKAMVIEARANAKKDSAKIRN 69

Query: 332 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTI 502
           RRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI  N  CS I
Sbjct: 70  RRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAI 126


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  130 bits (328), Expect = 8e-29
 Identities = 69/117 (58%), Positives = 83/117 (70%)
 Frame = +2

Query: 152 MALTTVPALLHLKTSLLFQTHSNPFPFTPLPLNYTRLSYKPLVVVQARANTRKESAKVRN 331
           MA    PAL H K+S +F  +   F +       +R   K  +VV+ARANTR ES K+RN
Sbjct: 1   MAQLNAPAL-HFKSSSVFGINPKSFIYFQ---GQSRCLIKKPLVVEARANTRTESPKIRN 56

Query: 332 RRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTI 502
           RR+ KKFNG++  PRLSVFCSDKQLYA LVDD+NKKCLFYGSTL KS R+NP CST+
Sbjct: 57  RRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFRENPPCSTV 113


>ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Glycine
           max]
          Length = 170

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/118 (59%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
 Frame = +2

Query: 152 MALTTVPALLHLKTSLLFQTHSNPFPFTPLPLNYTRLSYKPLVV-VQARANTRKESAKVR 328
           MA    P +L  K S LF    N F           ++ KPLV+  +ARANTRKES K+R
Sbjct: 4   MAQVNAP-MLQFKNSALFGIQPNSF--VCFQTQSRSITKKPLVIEARARANTRKESGKIR 60

Query: 329 NRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIRDNPSCSTI 502
           NRR+ KK+NG++  PRLSVFCSDKQLYA LVDD+NKKCLFYGSTLQKSIR +P CST+
Sbjct: 61  NRRMLKKYNGTATHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLQKSIRQDPPCSTL 118