BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030380
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein R...   395   e-135
emb|CBI40351.3| unnamed protein product [Vitis vinifera]              395   e-129
ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|2...   378   e-127
ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein R...   367   e-122
ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein R...   357   e-119

>ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis vinifera]
          Length = 379

 Score =  395 bits (1015), Expect(2) = e-135
 Identities = 201/303 (66%), Positives = 247/303 (81%), Gaps = 4/303 (1%)
 Frame = +2

Query: 407  QVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKG 586
            +VFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALI+AKV++VV+GMVDPNPIVASKG
Sbjct: 77   EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKG 136

Query: 587  VERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYSLSVNGRISDLLGEGVKE 766
            V+RL+++GI+VTV VEEELCKKLNEAYIH+MLTGKPF+TLRYSLS+NG I D LGEGV+E
Sbjct: 137  VDRLRDAGIEVTVAVEEELCKKLNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEE 196

Query: 767  SGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVANSPNSTVQLPHLADE 946
            +GGYYSQL+QEYD II S  ++T K SFP SQEP A QPL I++A SP S  Q+P    E
Sbjct: 197  AGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTE 256

Query: 947  A-SQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDNCGKRGLCSVLLDLHGGRGDL 1123
            A S+VIIFAD  T ++PE+ Q+GIETVVLDQ++LN +L+ C ++GLCS+LLDL G  G  
Sbjct: 257  ATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYF 316

Query: 1124 KDLLKEGLENGLLQKVVVEVLPFWDESNDR---LTLENLEQKVHQLDRLHSDISGETLVV 1294
            +DLLK+ LE  LLQKVVVEVLPFW  + +    L L+NL + + +L  + S  S +++V+
Sbjct: 317  EDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLRKGI-RLKNITSRNSNDSVVL 375

Query: 1295 YGY 1303
             GY
Sbjct: 376  EGY 378



 Score =  115 bits (287), Expect(2) = e-135
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 169 VSKSTIIMRNQISLFGVKCEAYS-EEDDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDG 345
           +SKS   +R+   L  V+CEA   +EDD FYMRRCVE+A KAIGCT+PNPMVGCVIVKDG
Sbjct: 1   MSKSQTGLRSYGGLVSVRCEALQGKEDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDG 60

Query: 346 SIVGQGFHPKAGQPHAEI 399
            +VG+GFHPKAGQPH E+
Sbjct: 61  KVVGEGFHPKAGQPHGEV 78


>emb|CBI40351.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  395 bits (1015), Expect(2) = e-129
 Identities = 201/303 (66%), Positives = 247/303 (81%), Gaps = 4/303 (1%)
 Frame = +2

Query: 407  QVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKG 586
            +VFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALI+AKV++VV+GMVDPNPIVASKG
Sbjct: 46   EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKG 105

Query: 587  VERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYSLSVNGRISDLLGEGVKE 766
            V+RL+++GI+VTV VEEELCKKLNEAYIH+MLTGKPF+TLRYSLS+NG I D LGEGV+E
Sbjct: 106  VDRLRDAGIEVTVAVEEELCKKLNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEE 165

Query: 767  SGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVANSPNSTVQLPHLADE 946
            +GGYYSQL+QEYD II S  ++T K SFP SQEP A QPL I++A SP S  Q+P    E
Sbjct: 166  AGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTE 225

Query: 947  A-SQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDNCGKRGLCSVLLDLHGGRGDL 1123
            A S+VIIFAD  T ++PE+ Q+GIETVVLDQ++LN +L+ C ++GLCS+LLDL G  G  
Sbjct: 226  ATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYF 285

Query: 1124 KDLLKEGLENGLLQKVVVEVLPFWDESNDR---LTLENLEQKVHQLDRLHSDISGETLVV 1294
            +DLLK+ LE  LLQKVVVEVLPFW  + +    L L+NL + + +L  + S  S +++V+
Sbjct: 286  EDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLRKGI-RLKNITSRNSNDSVVL 344

Query: 1295 YGY 1303
             GY
Sbjct: 345  EGY 347



 Score = 93.6 bits (231), Expect(2) = e-129
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = +1

Query: 259 MRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEI 399
           MRRCVE+A KAIGCT+PNPMVGCVIVKDG +VG+GFHPKAGQPH E+
Sbjct: 1   MRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHGEV 47


>ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|222844307|gb|EEE81854.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  378 bits (971), Expect(2) = e-127
 Identities = 191/303 (63%), Positives = 246/303 (81%), Gaps = 4/303 (1%)
 Frame = +2

Query: 407  QVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKG 586
            +VFALRDA DLAENATAYVSLEPCNHYGRTPPC+EAL++AKV++VV+GM+DPNPIVAS+G
Sbjct: 76   EVFALRDAEDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRG 135

Query: 587  VERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYSLSVNGRISDLLGEGVKE 766
            V+RL+++GI+V VGVEEELCK+LNEA+IH+MLTG PF+TLRYSLSVNG + + LGEGV +
Sbjct: 136  VQRLRDAGINVVVGVEEELCKRLNEAFIHKMLTGSPFVTLRYSLSVNGHLVNQLGEGVTD 195

Query: 767  SGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVANSPNSTVQLPHLADE 946
            +GGYYSQLLQEYD +I  SAS+TG S FP SQEP A QPL I++A  P+S +Q+P L +E
Sbjct: 196  TGGYYSQLLQEYDAVIL-SASLTGSSPFPASQEPGANQPLWILMAGGPSSPIQIPLLTEE 254

Query: 947  -ASQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDNCGKRGLCSVLLDLHGGRGDL 1123
             AS+V IF DK    +PE +++GIETVVLD+++LN IL+ C  RGLCSVL+DL G   +L
Sbjct: 255  AASKVTIFTDKEASEEPETSKKGIETVVLDKINLNAILEYCKSRGLCSVLMDLRGSFVEL 314

Query: 1124 KDLLKEGLENGLLQKVVVEVLPFWDESN--DRLTLENLEQKVHQLDRLHSDISG-ETLVV 1294
            ++LLK+G E  LLQK+VVEVLPFWDES+    LT     ++  +++ L   ISG +++V+
Sbjct: 315  EELLKDGTEQNLLQKIVVEVLPFWDESSGLSSLTASKSIRRRLKVNNLQPKISGDQSIVL 374

Query: 1295 YGY 1303
             GY
Sbjct: 375  EGY 377



 Score =  106 bits (264), Expect(2) = e-127
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = +1

Query: 238 EEDDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVGQGFHPKAGQPHAEI 399
           ++DD FYMRRCVE+A KAIGCT+PNPMVGCVIVKDG IVG+GFHPKAGQPHAE+
Sbjct: 24  DKDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEV 77


>ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 424

 Score =  367 bits (942), Expect(2) = e-122
 Identities = 185/305 (60%), Positives = 238/305 (78%), Gaps = 4/305 (1%)
 Frame = +2

Query: 407  QVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKG 586
            +VFALRDAGDLA++ATAYVSLEPCNH+GRTPPCTEALI+AKV++VVVGMVDPNPIVA KG
Sbjct: 120  EVFALRDAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKG 179

Query: 587  VERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYSLSVNGRISDLLGEGVKE 766
            VERL+++GI+V VGVEEELCK LNE YIHRMLTGKPFLTLRYSLSVNG   DLLG+GV +
Sbjct: 180  VERLRDAGIEVVVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFMDLLGDGVTD 239

Query: 767  SGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVANSPNSTVQLPHLADE 946
             GGYYS+LLQEYD ++ SS+  +   S P SQEP A QP++II+   P+S+ Q+P   + 
Sbjct: 240  CGGYYSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIILHKDPSSSNQIPLAING 299

Query: 947  AS-QVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDNCGKRGLCSVLLDLHGGRGDL 1123
             + +VIIF D  TV  PE+AQ+GIETV LDQ++L+ ILD C ++GLCSVLLD+ G  G+ 
Sbjct: 300  VTHKVIIFTDNKTVTAPEVAQQGIETVALDQINLDVILDYCNRQGLCSVLLDIRGSFGEF 359

Query: 1124 KDLLKEGLENGLLQKVVVEVLPFWD---ESNDRLTLENLEQKVHQLDRLHSDISGETLVV 1294
            +DL+KEG++   + K V E+LP W+   E +   TL++LEQ   ++  L S  S +++V+
Sbjct: 360  EDLVKEGIKKNYINKFVTEILPVWNGHTEPDPLHTLKSLEQGA-EVVNLKSKASDKSVVI 418

Query: 1295 YGYFR 1309
             GYF+
Sbjct: 419  EGYFK 423



 Score =  100 bits (250), Expect(2) = e-122
 Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
 Frame = +1

Query: 187 IMRNQISLFGVKC---EAYSEEDDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVG 357
           I R++     V+C      +++DD FY+RRCVE+A KA+G T+PNP+VGCVIVKDG +VG
Sbjct: 48  ICRSRCDGLRVQCAGSNGENDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVKDGKVVG 107

Query: 358 QGFHPKAGQPHAEI 399
           QGFHPKAGQPHAE+
Sbjct: 108 QGFHPKAGQPHAEV 121


>ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 425

 Score =  357 bits (915), Expect(2) = e-119
 Identities = 182/305 (59%), Positives = 233/305 (76%), Gaps = 4/305 (1%)
 Frame = +2

Query: 407  QVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVRRVVVGMVDPNPIVASKG 586
            +VFALRDAGDLA++ATAYVSLEPCNH+GRTPPCTEALI+AKV++VVVGMVDPNPIVA KG
Sbjct: 121  EVFALRDAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKG 180

Query: 587  VERLKESGIDVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYSLSVNGRISDLLGEGVKE 766
            VERL+++GI+V VGVEEELCK LNE YIHRMLTGKPFLTLRYSLSVNG   DLLG GV +
Sbjct: 181  VERLRDAGIEVIVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFLDLLGNGVTD 240

Query: 767  SGGYYSQLLQEYDGIIYSSASITGKSSFPTSQEPLAKQPLQIIVANSPNSTVQLP-HLAD 943
             GGY+S+LLQEYD ++ SS+  +   S P SQEP A QP++II+   P S+ Q+   +  
Sbjct: 241  CGGYHSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIIIHKDPGSSKQIQLAING 300

Query: 944  EASQVIIFADKNTVLDPEIAQRGIETVVLDQMHLNTILDNCGKRGLCSVLLDLHGGRGDL 1123
               +VIIF D  TV  PE+AQ+GIE VVLDQ++L+ ILD C  +GLCSVLLD+ G  G+ 
Sbjct: 301  VTGKVIIFTDNKTVTAPEVAQQGIEIVVLDQINLDVILDYCNCQGLCSVLLDIRGSFGEF 360

Query: 1124 KDLLKEGLENGLLQKVVVEVLPFWD---ESNDRLTLENLEQKVHQLDRLHSDISGETLVV 1294
            ++L+KEG++   + K V E+LP WD   E +   TL++ EQ + ++  L S  S +++V+
Sbjct: 361  EELVKEGIKKNYINKFVTEILPVWDGLAEPDPLQTLKSSEQGL-KVVNLKSMASDQSVVI 419

Query: 1295 YGYFR 1309
             GYF+
Sbjct: 420  EGYFK 424



 Score =  100 bits (249), Expect(2) = e-119
 Identities = 44/74 (59%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
 Frame = +1

Query: 187 IMRNQISLFGVKCEAYS---EEDDAFYMRRCVEIANKAIGCTTPNPMVGCVIVKDGSIVG 357
           + R++     V+C A +   ++DD FY+RRCVE+A KA+G T+PNP+VGCVIVKDG +VG
Sbjct: 49  VWRSRCDGLRVQCAASNGENDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVKDGKVVG 108

Query: 358 QGFHPKAGQPHAEI 399
           +GFHPKAGQPHAE+
Sbjct: 109 EGFHPKAGQPHAEV 122