BLASTX nr result

ID: Coptis21_contig00030372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030372
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219...    89   4e-16
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    88   6e-16
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    88   6e-16
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    87   1e-15

>ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219773 [Cucumis sativus]
          Length = 209

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 4   KKHRRAIWSITDKDGISVNSQAQIIDVFTEFYKDMIGSSASLHVPSKFFTNLTVKGSLTN 183
           ++   A+ S+ D DG  + +  Q+  V   ++KD++GS    +          V+   T 
Sbjct: 65  RQSSNALRSVIDPDGNRLTNHDQVTQVVVNYFKDILGSQNISYKELSTSIEEIVQFRWTE 124

Query: 184 D--HILDADISQEEIKHALFSMDDTKAPGPDGFNSFFYKFCWSTVGHDFTNAVMNVFNVG 357
           +    L + I +EE++  LFSM+  KAPGPDG++  F+K  W+ VG  F + V++ F   
Sbjct: 125 ECCQTLQSPIGREEVRRVLFSMEGGKAPGPDGYSGGFFKGAWTVVGEGFCDVVLHFFETN 184

Query: 358 KMPRGVNSTLLCLIPK 405
             P+GVN+T + LIPK
Sbjct: 185 YFPQGVNTTAITLIPK 200


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
 Frame = +1

Query: 10   HRRAIW--------SITDKDGISVNSQAQIIDVFTEFYKDMIGSSASLH--VPSKFFTNL 159
            H +A+W        S+ D  G    S   +  + TE+++++  +  SL   + S FF + 
Sbjct: 776  HSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVYSADPSLDHSIVSSFFQS- 834

Query: 160  TVKGSLTNDHILDADISQEEIKHALFSMDDTKAPGPDGFNSFFYKFCWSTVGHDFTNAVM 339
              K S   +  L +D+++EEI  A+F +   KAPGPDGF++ FY+  W T+  +   AV 
Sbjct: 835  --KVSAQMNEALCSDLTEEEISTAIFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAVH 892

Query: 340  NVFNVGKMPRGVNSTLLCLIPKVQ 411
            N F +G MP G+N T + LIPK++
Sbjct: 893  NFFIIGVMPEGINDTAIVLIPKIK 916


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
 Frame = +1

Query: 10   HRRAIW--------SITDKDGISVNSQAQIIDVFTEFYKDMIGSSASLH--VPSKFFTNL 159
            H +A+W        S+ D  G    S   +  + TE+++++  +  SL   + S FF + 
Sbjct: 769  HSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVYSADPSLDHSIVSSFFQS- 827

Query: 160  TVKGSLTNDHILDADISQEEIKHALFSMDDTKAPGPDGFNSFFYKFCWSTVGHDFTNAVM 339
              K S   +  L +D+++EEI  A+F +   KAPGPDGF++ FY+  W T+  +   AV 
Sbjct: 828  --KVSAQMNEALCSDLTEEEISTAIFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAVH 885

Query: 340  NVFNVGKMPRGVNSTLLCLIPKVQ 411
            N F +G MP G+N T + LIPK++
Sbjct: 886  NFFIIGVMPEGINDTAIVLIPKIK 909


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
 Frame = +1

Query: 4   KKHRRAIWSITDKDGISVNSQAQIIDVFTEFYKDMIGSSASLHVPSK--FFTNLTVKGSL 177
           + +R  + S+T +DG  V     +      ++  ++G      V ++    + + +K S 
Sbjct: 345 RHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMESAINLKLSS 404

Query: 178 TNDHILDADISQEEIKHALFSMDDTKAPGPDGFNSFFYKFCWSTVGHDFTNAVMNVFNVG 357
           T  H+L   ++++EIKHA+FS+ + KAPG DGFN+ F+K  W  VG D  NAV ++F   
Sbjct: 405 TQQHVLAQVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTR 464

Query: 358 KMPRGVNSTLLCLIPKVQN 414
           +M + +N+T + LIPKV N
Sbjct: 465 RMLKEMNATSISLIPKVAN 483


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/137 (35%), Positives = 75/137 (54%)
 Frame = +1

Query: 1   EKKHRRAIWSITDKDGISVNSQAQIIDVFTEFYKDMIGSSASLHVPSKFFTNLTVKGSLT 180
           E+K    I  +  +DG  V S+ +      +++K+M  S+   H P +  + +  K +  
Sbjct: 573 ERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNMFQSNGCQH-PERLLSKVKKKVTEE 631

Query: 181 NDHILDADISQEEIKHALFSMDDTKAPGPDGFNSFFYKFCWSTVGHDFTNAVMNVFNVGK 360
            +  L A+   EEIK ++ S+ D KAPGPDG  + FYK  W  VG   T+ V+++ N G+
Sbjct: 632 MNECLMAEFIVEEIKTSIDSIGDLKAPGPDGMPAVFYKNFWDVVGGKVTSEVLDILNGGQ 691

Query: 361 MPRGVNSTLLCLIPKVQ 411
           MP G N T + LIPKV+
Sbjct: 692 MPLGWNETTIVLIPKVK 708


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