BLASTX nr result

ID: Coptis21_contig00030369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030369
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo...    91   8e-17
emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]    91   8e-17
tpg|DAA61684.1| TPA: putative disease resistance/zinc finger/chr...    87   1e-15
ref|XP_002891794.1| predicted protein [Arabidopsis lyrata subsp....    86   2e-15
ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [S...    86   2e-15

>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
           gi|297743026|emb|CBI35893.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
 Frame = -2

Query: 199 MLTCIACTKQIGGGGSIHKTGEEDDE----PNTKHAIKTLTSQIKDMALKASGAYRHCKP 32
           MLTCIAC+KQ+ G  S+H+  E + E    P+TKHAIK LT+QIKDMALKASGAYR+CKP
Sbjct: 1   MLTCIACSKQVSGR-SLHEQEEGEGEAVATPSTKHAIKALTAQIKDMALKASGAYRNCKP 59

Query: 31  CSSGSSNNQD 2
           CS  S  NQD
Sbjct: 60  CSGSSGQNQD 69


>emb|CAN69466.1| hypothetical protein VITISV_042553 [Vitis vinifera]
          Length = 363

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
 Frame = -2

Query: 199 MLTCIACTKQIGGGGSIHKTGEEDDE----PNTKHAIKTLTSQIKDMALKASGAYRHCKP 32
           MLTCIAC+KQ+ G  S+H+  E + E    P+TKHAIK LT+QIKDMALKASGAYR+CKP
Sbjct: 1   MLTCIACSKQVSGR-SLHEQEEGEGEAVATPSTKHAIKALTAQIKDMALKASGAYRNCKP 59

Query: 31  CSSGSSNNQD 2
           CS  S  NQD
Sbjct: 60  CSGSSGQNQD 69


>tpg|DAA61684.1| TPA: putative disease resistance/zinc finger/chromosome
           condensation-like region protein [Zea mays]
          Length = 396

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 12/74 (16%)
 Frame = -2

Query: 199 MLTCIACTKQ--IGGGGSIHKTGEEDD----------EPNTKHAIKTLTSQIKDMALKAS 56
           MLTCIAC+KQ   GGG  +H+  E+DD           P T+HAIK LT+QIKDMALKAS
Sbjct: 1   MLTCIACSKQQFAGGGPPLHEPPEDDDVVDGGGGGTATPRTRHAIKALTAQIKDMALKAS 60

Query: 55  GAYRHCKPCSSGSS 14
           GAYRHCKPC+  S+
Sbjct: 61  GAYRHCKPCAGSSA 74


>ref|XP_002891794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337636|gb|EFH68053.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 5/71 (7%)
 Frame = -2

Query: 199 MLTCIACTKQIG--GGGSIHKTGEEDD---EPNTKHAIKTLTSQIKDMALKASGAYRHCK 35
           MLTCIACTKQ+    GGS  +  EED     P TK AIK+LTSQ+KDMA+KASGAY++CK
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEDGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60

Query: 34  PCSSGSSNNQD 2
           PCS  S+ NQ+
Sbjct: 61  PCSGTSNRNQN 71


>ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [Sorghum bicolor]
           gi|241923665|gb|EER96809.1| hypothetical protein
           SORBIDRAFT_02g026020 [Sorghum bicolor]
          Length = 416

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 15/77 (19%)
 Frame = -2

Query: 199 MLTCIACTKQ---IGGGGSIHKTGEEDD------------EPNTKHAIKTLTSQIKDMAL 65
           MLTCIAC+KQ    GGG  +H+  E+DD             P+T+HAIK LT+QIKDMAL
Sbjct: 1   MLTCIACSKQQFAAGGGPPLHEPPEDDDVVDGGGAIGGAGTPSTRHAIKALTAQIKDMAL 60

Query: 64  KASGAYRHCKPCSSGSS 14
           KASGAYRHCKPC+  S+
Sbjct: 61  KASGAYRHCKPCAGSSA 77


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