BLASTX nr result
ID: Coptis21_contig00030355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00030355
(1149 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27895.3| unnamed protein product [Vitis vinifera] 154 3e-35
ref|XP_002522601.1| conserved hypothetical protein [Ricinus comm... 139 1e-30
ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containin... 138 3e-30
sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-con... 136 1e-29
gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japo... 136 1e-29
>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 154 bits (390), Expect = 3e-35
Identities = 105/308 (34%), Positives = 146/308 (47%), Gaps = 21/308 (6%)
Frame = +2
Query: 2 KKRAQQDKMSGVKRLKLHTISKPIQVKYCRHYLKGSCHQGDSCKYSHD----IKKPEFCK 169
KKRA+++K GVKRL+L +SKP V YCRHYLKG CH+GD C++SHD K C
Sbjct: 206 KKRAEKNKELGVKRLRLLPVSKPKTVTYCRHYLKGRCHEGDHCRFSHDTIPLTKSSPCCH 265
Query: 170 YFLNNCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXXKQKA 349
+ C+KG DCP+DH S YPC+ Y S+GFC RG C FSHK+PL K
Sbjct: 266 FARGTCMKGDDCPFDHQLSNYPCNNYVSKGFCSRGDDCLFSHKMPLKESSPTAVNV-CKP 324
Query: 350 EKNSPLQGSAILGRQPNKGSTSKESLNMSKNMTRETPASFGAIRHQGQNIAD--LKPPAQ 523
P S ++ + TS ++ N + P S + + +A+ LKPP Q
Sbjct: 325 VSEPPSLPSKSYSKKLDMNGTSHQNGNSLSHSVGIFPQS-----NMEKKVAEIVLKPPEQ 379
Query: 524 APKGISFLMFGN-----DSSKQPNGQSPPVGDNVASTCFKNKGVSERLYSSNETLGRMSS 688
A +GI+ L FG + G SP + + V KN+G + + NE R
Sbjct: 380 ASRGINSLSFGKSPMDYSGKLKQIGSSPTMDEGVEVDKQKNQG---EVQNMNEKAKRTPV 436
Query: 689 ALP------VGQSSAMISDGQDKNLHNSAQKAQPSTSY----ESKKNDQSVPSTASNGNI 838
+P + A ++D K L S + +S K Q S+A +GNI
Sbjct: 437 TVPPRGINFLSFGKAPLNDSSVKELAGSPSNREDGNKILPLGDSNKYKQVGSSSARDGNI 496
Query: 839 PTISSILQ 862
S + Q
Sbjct: 497 NVSSQLNQ 504
>ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
gi|223538077|gb|EEF39688.1| conserved hypothetical
protein [Ricinus communis]
Length = 932
Score = 139 bits (351), Expect = 1e-30
Identities = 89/255 (34%), Positives = 127/255 (49%), Gaps = 12/255 (4%)
Frame = +2
Query: 2 KKRAQQDKMSGVKRLKLHTISKPIQVKYCRHYLKGSCHQGDSCKYSHDI----KKPEFCK 169
KKRAQ+++ GVKRLKL + KP V +CRHY++G C +G+ CK+SHD K C
Sbjct: 464 KKRAQKNRELGVKRLKLRPVEKPKPVVFCRHYIRGRCQEGEKCKFSHDTIPLTKSKPCCH 523
Query: 170 YFLNNCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXXKQKA 349
+ N+CLKG DCP+DH+ SKYPC Y S G C RG C FSHK+PL K+
Sbjct: 524 FARNSCLKGDDCPFDHELSKYPCTNYASTGSCSRGDDCMFSHKLPL----------KEDL 573
Query: 350 EKNSPLQGSAILGRQPNKGSTSKESLN---MSKNMTRETPASFGAIRHQG--QNIAD--L 508
S + + S SK+ L+ +S + + +P + G + + +N+ L
Sbjct: 574 PSASNVCTPDLNSPSLPHASNSKKQLDSGGISHHTAKASPDTGGGLSRKDTERNVPKGVL 633
Query: 509 KPPAQAPKGISFLMFGNDSSKQPNGQSPPVGDNVASTCFK-NKGVSERLYSSNETLGRMS 685
P PKGISFL G S + + +P S FK + SNE +
Sbjct: 634 GPHVLVPKGISFLSAGKSSVVESSHSTPRSSSLSRSEGFKVGNQRDQSAAGSNENSNEIP 693
Query: 686 SALPVGQSSAMISDG 730
+P +A+I +G
Sbjct: 694 KRIP----AALIPNG 704
>ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
[Brachypodium distachyon]
Length = 685
Score = 138 bits (347), Expect = 3e-30
Identities = 104/312 (33%), Positives = 138/312 (44%), Gaps = 22/312 (7%)
Frame = +2
Query: 5 KRAQQDKMSGVKRLKLHTISKPIQVKYCRHYLKGSCHQGDSCKYSHD---IKKPEFCKYF 175
KRA Q + GVKRLKL I KP V+YC YL G C QG+ CK+SHD + K + C +F
Sbjct: 406 KRALQREADGVKRLKLAPIIKPKVVRYCHFYLHGKCQQGNVCKFSHDTTPLTKSKPCTHF 465
Query: 176 LN-NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXXKQKA- 349
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH P K A
Sbjct: 466 ARGSCLKGDDCPYDHELSKYPCHNFLGNGMCLRGDKCKFSHVAPTADDSSTKDAKKSDAS 525
Query: 350 ---------EKNSPLQGSAILGRQPNKGSTSKESLNMSKNMTRETPASFGAIRHQGQNIA 502
E+NS + S + +P + +K + + G+I Q
Sbjct: 526 LVSEKLTSKEQNSSQKISTVHDGEPVASAPTKHYSILK---------TLGSISKNAQ--- 573
Query: 503 DLKPPAQAPKGISFLMF--GNDSSKQPNGQSPPVGDNVASTCFKNKGVSERLYSSNETLG 676
K A PKG+ FL F G S + +PP G+ V +
Sbjct: 574 --KASAHMPKGVQFLAFSKGRSDSSILHQDAPPPGNFVGPQAAEGD-------------- 617
Query: 677 RMSSALPVGQSSAMISDGQDKNLHNSAQKAQPSTSYESKKNDQSVPSTASNGNIPT---- 844
+A P SA S+ NS+++A E KK S S A G++ T
Sbjct: 618 --KNAQPNRHRSAARSN------ENSSKEASSHPISEQKKTSLSADSIAVLGSVSTQHEV 669
Query: 845 --ISSILQDFLF 874
S ILQ+FLF
Sbjct: 670 SEASRILQEFLF 681
>sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=OsC3H7 gi|52076312|dbj|BAD45097.1| zinc finger
(CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 136 bits (342), Expect = 1e-29
Identities = 102/308 (33%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Frame = +2
Query: 5 KRAQQDKMSGVKRLKLHTISKPIQVKYCRHYLKGSCHQGDSCKYSHD---IKKPEFCKYF 175
KRA Q + GVKRLKL + KP VK C YL G C QG+ CK+SHD + K + C ++
Sbjct: 408 KRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHY 467
Query: 176 LN-NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXXKQKAE 352
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH +P K A
Sbjct: 468 ARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNAS 527
Query: 353 KNSPLQGSAILGRQPNKGSTSKE-SLNMSKNMTRETPASFGAIRHQG--QNIADL----- 508
P K + ++ S + + PA+ I+H +N+A +
Sbjct: 528 S------------VPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQ 575
Query: 509 KPPAQAPKGISFLMFGNDSSKQPNGQSPPVGDNVASTCFKN-KGVSERLYSSNETLGRMS 685
K P + P+GI FL F +K S D V++ KN G + + +
Sbjct: 576 KVPVRIPRGIQFLPF----NKARPDSSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKK 631
Query: 686 SALPVGQSSAMISDGQDKNLHNSAQKAQPSTSYESKKND----QSVPSTASNGN-IPTIS 850
G SA + D +D S+++A E KKN +VPS+ S + + S
Sbjct: 632 LGKHNGHRSAPLLDEKD-----SSKQANLHPCSEPKKNSLPTTAAVPSSVSTQHEVSEAS 686
Query: 851 SILQDFLF 874
ILQ+FLF
Sbjct: 687 RILQEFLF 694
>gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
Length = 698
Score = 136 bits (342), Expect = 1e-29
Identities = 102/308 (33%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Frame = +2
Query: 5 KRAQQDKMSGVKRLKLHTISKPIQVKYCRHYLKGSCHQGDSCKYSHD---IKKPEFCKYF 175
KRA Q + GVKRLKL + KP VK C YL G C QG+ CK+SHD + K + C ++
Sbjct: 408 KRALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHY 467
Query: 176 LN-NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXXKQKAE 352
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH +P K A
Sbjct: 468 ARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNAS 527
Query: 353 KNSPLQGSAILGRQPNKGSTSKE-SLNMSKNMTRETPASFGAIRHQG--QNIADL----- 508
P K + ++ S + + PA+ I+H +N+A +
Sbjct: 528 S------------VPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQ 575
Query: 509 KPPAQAPKGISFLMFGNDSSKQPNGQSPPVGDNVASTCFKN-KGVSERLYSSNETLGRMS 685
K P + P+GI FL F +K S D V++ KN G + + +
Sbjct: 576 KVPVRIPRGIQFLPF----NKARPDSSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKK 631
Query: 686 SALPVGQSSAMISDGQDKNLHNSAQKAQPSTSYESKKND----QSVPSTASNGN-IPTIS 850
G SA + D +D S+++A E KKN +VPS+ S + + S
Sbjct: 632 LGKHNGHRSAPLLDEKD-----SSKQANLHPCSEPKKNSLPTTAAVPSSVSTQHEVSEAS 686
Query: 851 SILQDFLF 874
ILQ+FLF
Sbjct: 687 RILQEFLF 694