BLASTX nr result

ID: Coptis21_contig00030346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030346
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinu...    69   7e-10
emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]    68   1e-09
ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08
ref|XP_003611541.1| Protein ABSCISIC ACID-INSENSITIVE [Medicago ...    59   6e-07

>ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|222853789|gb|EEE91336.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/74 (41%), Positives = 48/74 (64%)
 Frame = +3

Query: 3   RMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDNXXXXXXXXXXXXXXXXX 182
           RMRKQ+H+++LRNQVNRLR++NRE+ NRL+++ +HCH ++ +N                 
Sbjct: 69  RMRKQKHMDNLRNQVNRLRVENRELTNRLRIVLYHCHSVRTENDWLRSEYSMLRKKLSET 128

Query: 183 XXXXVFRQLQRFSS 224
               + RQLQ+F+S
Sbjct: 129 SQILMMRQLQQFTS 142


>ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinus communis]
           gi|223526547|gb|EEF28805.1| Ocs element-binding factor,
           putative [Ricinus communis]
          Length = 201

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +3

Query: 3   RMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDNXXXXXXXXXXXXXXXXX 182
           RMRKQ+HLE+LRNQVNRLR++NRE+ NRL+ + +H   ++R+N                 
Sbjct: 109 RMRKQKHLENLRNQVNRLRVENREMTNRLRFVLYHWQSVRRENDQLRSEHSMLRQKLSNI 168

Query: 183 XXXXVFRQLQRFSS 224
               +FRQLQ+F+S
Sbjct: 169 RQILMFRQLQQFTS 182


>emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]
          Length = 297

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
 Frame = +3

Query: 3   RMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDNXXXXXXXXXXXXXXXXX 182
           RMRKQ+H+E+LRNQ+N+LRI NRE+ NRL+   +H HL+  DN                 
Sbjct: 164 RMRKQKHIENLRNQLNQLRIQNRELTNRLRSFTYHSHLVDSDNVQLRSEAIILRRKLSEF 223

Query: 183 XXXXVFRQLQR-------FSSPLTTVNE 245
               VFRQLQR        +S  T+VNE
Sbjct: 224 RQILVFRQLQRQISSAWPCNSVTTSVNE 251


>ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|222860783|gb|EEE98325.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   RMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDNXXXXXXXXXXXXXXXXX 182
           RMRKQ+H+E+LRNQVNRLRI+NRE+ NRL+ + +H H ++ D                  
Sbjct: 100 RMRKQKHVENLRNQVNRLRIENRELTNRLRFVLYHSHGVRTDYDRLRSEYSTLRKKLSDI 159

Query: 183 XXXXVFRQLQRFSS 224
               + RQLQ  +S
Sbjct: 160 RQILMMRQLQELTS 173


>ref|XP_003611541.1| Protein ABSCISIC ACID-INSENSITIVE [Medicago truncatula]
           gi|355512876|gb|AES94499.1| Protein ABSCISIC
           ACID-INSENSITIVE [Medicago truncatula]
          Length = 157

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   RMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDN 131
           RMRKQRHLE+LRNQVNR R++NRE+ N LQ + + C+ ++ +N
Sbjct: 77  RMRKQRHLENLRNQVNRFRVENRELNNGLQFLLYQCNRVRTEN 119


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