BLASTX nr result

ID: Coptis21_contig00030345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030345
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu...   142   3e-32
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   134   6e-30
ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   131   5e-29
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
gb|ABK95014.1| unknown [Populus trichocarpa]                          124   6e-27

>ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis]
           gi|223531987|gb|EEF33799.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 491

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   EKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRHVGYVIGIGI 180
           + NCSCWG+V+NN +G+CY +DYPIQ++V VGDE+K+GYFK+    +KK+ VG  IG+GI
Sbjct: 375 QSNCSCWGAVYNNGSGFCYFVDYPIQTVVGVGDESKVGYFKMWKGKKKKKEVGVGIGVGI 434

Query: 181 LVCAVLLFFAVAGFGALRIWNRRTRVNR-FVHDDGISPGPYRDLGSGSFRSVELCKR 348
           L  A+L+     GFG  R+W RR  V   F  ++G+SPGPY+DLGS SFRS+E+ +R
Sbjct: 435 LSGAILILIGAIGFGVFRMWKRRRGVKGIFEEENGVSPGPYKDLGSASFRSIEMGRR 491


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  134 bits (338), Expect = 6e-30
 Identities = 58/117 (49%), Positives = 80/117 (68%)
 Frame = +1

Query: 1   EKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRHVGYVIGIGI 180
           E NCSCWGSV+NN +G+CY++DYPI++L+ VGD+ K+GYFKVR   +KK   G+   IG+
Sbjct: 372 ENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVREGPQKKAESGFGFVIGL 431

Query: 181 LVCAVLLFFAVAGFGALRIWNRRTRVNRFVHDDGISPGPYRDLGSGSFRSVELCKRD 351
           L   VL F  V GFG  ++W R+          G++PGPY+ LG+ SFRS+E+  RD
Sbjct: 432 LGATVLAFGGVVGFGVYKVWRRKGAKGVSEEAGGVNPGPYKTLGAASFRSIEMTLRD 488


>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  131 bits (330), Expect = 5e-29
 Identities = 56/113 (49%), Positives = 78/113 (69%)
 Frame = +1

Query: 1   EKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRHVGYVIGIGI 180
           E NCSCWGSV+NN +G+CY++DYPI++L+ VGD+ K+GYFKVR   +KK   G+   IG+
Sbjct: 372 ENNCSCWGSVYNNASGFCYRVDYPIRTLLGVGDDTKVGYFKVREGPQKKAESGFGFVIGL 431

Query: 181 LVCAVLLFFAVAGFGALRIWNRRTRVNRFVHDDGISPGPYRDLGSGSFRSVEL 339
           L   VL F  V GFG  ++W R+          G++PGPY+ LG+ SFRS+E+
Sbjct: 432 LGATVLAFGGVVGFGVYKVWRRKGAKGVSEEAGGVNPGPYKTLGAASFRSIEM 484


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/116 (50%), Positives = 85/116 (73%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   EKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRHVGYVIGIGI 180
           ++NCSCWG+V+NN TG+CY ++YPIQ+LV VGDE+K+GYFKVRT  ++  H    +GI +
Sbjct: 373 QRNCSCWGAVYNNATGFCYPLNYPIQTLVGVGDESKVGYFKVRT--KRSWHKKMKVGIRV 430

Query: 181 L-VCAVLLFFAVAGFGALRIWNRRTRVNRFVHDD--GISPGPYRDLGSGSFRSVEL 339
           L    V+L   V G+G  +IWNRR R  + V ++   +SPGPY++LGS SF+S+E+
Sbjct: 431 LGAVIVVLTGVVLGYGGYKIWNRRRRGPKRVLEEKTEVSPGPYKNLGSASFKSIEM 486


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/116 (50%), Positives = 85/116 (73%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   EKNCSCWGSVFNNVTGYCYKIDYPIQSLVSVGDENKIGYFKVRTVVEKKRHVGYVIGIGI 180
           ++NCSCWG+V+NN TG+CY ++YPIQ+LV VGDE+K+GYFKVRT  ++  H    +GI +
Sbjct: 373 QRNCSCWGAVYNNATGFCYTLNYPIQTLVGVGDESKVGYFKVRT--KRSWHKKIKVGIRV 430

Query: 181 L-VCAVLLFFAVAGFGALRIWNRRTRVNRFVHDD--GISPGPYRDLGSGSFRSVEL 339
           L    V+L   V G+G  +IWNRR R  + V ++   +SPGPY++LGS SF+S+E+
Sbjct: 431 LGAVIVVLTGVVLGYGGYKIWNRRRRGPKRVLEEKTEVSPGPYKNLGSASFKSIEM 486


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