BLASTX nr result

ID: Coptis21_contig00030331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030331
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528908.1| transporter, putative [Ricinus communis] gi|...   110   9e-23
ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [...   105   5e-21
ref|XP_002518297.1| transporter, putative [Ricinus communis] gi|...   105   5e-21
ref|XP_003534267.1| PREDICTED: protein spinster homolog 1-like [...   104   9e-21
ref|XP_003593336.1| Spinster-like protein [Medicago truncatula] ...   103   1e-20

>ref|XP_002528908.1| transporter, putative [Ricinus communis]
           gi|223531662|gb|EEF33488.1| transporter, putative
           [Ricinus communis]
          Length = 505

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/78 (69%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +2

Query: 35  SRFYKDMKALF-DKVYVVNVLGYVAYNFVIGAYSYWGPKAGYGIYHMDNADTLFXXXXXX 211
           S+F KDMK L  DKVYVVNVLGY++YNFVIGAYSYWGPKAGY IYHM NAD +F      
Sbjct: 268 SQFSKDMKVLLVDKVYVVNVLGYISYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTII 327

Query: 212 XXXXXXLAGGFILDRMNS 265
                 LAGGFILDRMN+
Sbjct: 328 CGILGTLAGGFILDRMNA 345


>ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 532

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +2

Query: 29  KGSRFYKDMKALF-DKVYVVNVLGYVAYNFVIGAYSYWGPKAGYGIYHMDNADTLFXXXX 205
           K SRF  DMK L  DKVYVVNVLGY+AYNFVIGAYSYWGPKAGY IYHM +AD +F    
Sbjct: 292 KFSRFLNDMKELLLDKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMTDADLIFGGIT 351

Query: 206 XXXXXXXXLAGGFILDRMNS 265
                   LAGGF+LD M++
Sbjct: 352 IVCGIVGTLAGGFVLDYMSN 371


>ref|XP_002518297.1| transporter, putative [Ricinus communis]
           gi|223542517|gb|EEF44057.1| transporter, putative
           [Ricinus communis]
          Length = 541

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/78 (66%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +2

Query: 35  SRFYKDMKALF-DKVYVVNVLGYVAYNFVIGAYSYWGPKAGYGIYHMDNADTLFXXXXXX 211
           SRF KDMKAL  +KVYVVNVLGY+AYNFVIGAYSYWGPKAGY IY+M NAD +F      
Sbjct: 304 SRFIKDMKALLVEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYNMTNADMIFGGITIV 363

Query: 212 XXXXXXLAGGFILDRMNS 265
                 +AGG+ILD M S
Sbjct: 364 CGILGTMAGGYILDYMTS 381


>ref|XP_003534267.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 496

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   SRYWKKFKGSRFYKDMKALF-DKVYVVNVLGYVAYNFVIGAYSYWGPKAGYGIYHMDNAD 184
           S+ W +F  + F KDM+ L  D+VYV+NVLGY+AYNFVIGAYSYWGPKAGY IYHM+NAD
Sbjct: 256 SKLWNQF--TIFSKDMQELLHDQVYVINVLGYIAYNFVIGAYSYWGPKAGYSIYHMNNAD 313

Query: 185 TLFXXXXXXXXXXXXLAGGFILDRMNS 265
            LF            LAGG  LDR++S
Sbjct: 314 LLFGGITIVCGIVGTLAGGLFLDRISS 340


>ref|XP_003593336.1| Spinster-like protein [Medicago truncatula]
           gi|355482384|gb|AES63587.1| Spinster-like protein
           [Medicago truncatula]
          Length = 571

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +2

Query: 35  SRFYKDMKALF-DKVYVVNVLGYVAYNFVIGAYSYWGPKAGYGIYHMDNADTLFXXXXXX 211
           SRF+ DMKAL  +KVYV+N+LGY+AYNFV+GAYSYWGPKAGY IYHM NAD +F      
Sbjct: 304 SRFWIDMKALLLNKVYVINILGYIAYNFVLGAYSYWGPKAGYNIYHMTNADLVFGGITIV 363

Query: 212 XXXXXXLAGGFILDRMNS 265
                 LAGGF+LD M +
Sbjct: 364 CGIVGTLAGGFVLDYMTN 381


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