BLASTX nr result
ID: Coptis21_contig00030322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030322 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304497.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002304497.1| predicted protein [Populus trichocarpa] gi|222841929|gb|EEE79476.1| predicted protein [Populus trichocarpa] Length = 381 Score = 56.2 bits (134), Expect = 3e-06 Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 23/163 (14%) Frame = +2 Query: 83 VLPVPHQYYVCGSCLGWLVLIDDR---------LDMQLINPLSGTKFEXXXXXXXXXXXX 235 +L +P CGS GWL+L D + DM ++NP+SG KFE Sbjct: 61 MLTIPLAGKYCGSYRGWLILEDRKEEAFTNKINKDMLVLNPVSGEKFELPDVSTLPPY-- 118 Query: 236 GDDFC------KFNVCRAVMSISPITSASSQTTVLIIYGTPPSLAFSKPGDKSWTPVESA 397 G D ++ + V+S P S S+ VL IY +A+ K G++ W + Sbjct: 119 GTDGVPSWYPRSCSIEKVVLSCCPNPSESNSCLVLAIYNYG-QIAYCKLGNREWRSIGFG 177 Query: 398 RPITTEGLIFLGYLDAIYYKERFYVTY--------NCGGIDFC 502 + GYLDA+Y +RFYV + N G D C Sbjct: 178 H----SSIDHEGYLDAVYCHDRFYVLHVTKKLFVCNFDGSDLC 216