BLASTX nr result

ID: Coptis21_contig00030316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030316
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF87895.1| unknown [Zea mays] gi|414876473|tpg|DAA53604.1| T...   274   6e-72
ref|NP_001148790.1| delta-7-sterol-C5 [Zea mays] gi|195620514|gb...   273   8e-72
ref|XP_002516756.1| sterol desaturase, putative [Ricinus communi...   273   1e-71
gb|AAD38120.1|AF105034_1 delta7 sterol C-5 desaturase [Arabidops...   272   2e-71
gb|ABA01481.1| sterol-C5-desaturase DWF7 [Gossypium hirsutum]         272   2e-71

>gb|ACF87895.1| unknown [Zea mays] gi|414876473|tpg|DAA53604.1| TPA:
           delta-7-sterol-C5 [Zea mays]
          Length = 276

 Score =  274 bits (700), Expect = 6e-72
 Identities = 117/127 (92%), Positives = 123/127 (96%)
 Frame = +3

Query: 3   YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGVLQAMPHV 182
           YL+FVEFGIYWMHRELHDIKPLYKYLHATHHIYNK+NTLSPFAGLAFHPLDGVLQA+PHV
Sbjct: 138 YLIFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKENTLSPFAGLAFHPLDGVLQAIPHV 197

Query: 183 IALFLIPTHFTTHIALLFIEAVWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTV 362
            ALFL PTHF THIALLF+EAVWT NIHDCIHGK+WPVMGAGYHTIHHTTYRHNYGHYT+
Sbjct: 198 FALFLFPTHFRTHIALLFLEAVWTTNIHDCIHGKIWPVMGAGYHTIHHTTYRHNYGHYTI 257

Query: 363 WMDWMFG 383
           WMDWMFG
Sbjct: 258 WMDWMFG 264


>ref|NP_001148790.1| delta-7-sterol-C5 [Zea mays] gi|195620514|gb|ACG32087.1|
           delta-7-sterol-C5 [Zea mays] gi|195622190|gb|ACG32925.1|
           delta-7-sterol-C5 [Zea mays] gi|195638006|gb|ACG38471.1|
           delta-7-sterol-C5 [Zea mays]
          Length = 276

 Score =  273 bits (699), Expect = 8e-72
 Identities = 116/127 (91%), Positives = 123/127 (96%)
 Frame = +3

Query: 3   YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGVLQAMPHV 182
           YL+FVEFGIYWMHRELHDIKPLYKYLHATHHIYNK+NTLSPFAGLAFHPLDG+LQA+PHV
Sbjct: 138 YLIFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKENTLSPFAGLAFHPLDGILQAIPHV 197

Query: 183 IALFLIPTHFTTHIALLFIEAVWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTV 362
            ALFL PTHF THIALLF+EAVWT NIHDCIHGK+WPVMGAGYHTIHHTTYRHNYGHYT+
Sbjct: 198 FALFLFPTHFRTHIALLFLEAVWTTNIHDCIHGKIWPVMGAGYHTIHHTTYRHNYGHYTI 257

Query: 363 WMDWMFG 383
           WMDWMFG
Sbjct: 258 WMDWMFG 264


>ref|XP_002516756.1| sterol desaturase, putative [Ricinus communis]
           gi|223544129|gb|EEF45654.1| sterol desaturase, putative
           [Ricinus communis]
          Length = 276

 Score =  273 bits (697), Expect = 1e-71
 Identities = 116/127 (91%), Positives = 123/127 (96%)
 Frame = +3

Query: 3   YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGVLQAMPHV 182
           YLV VEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDG+LQA+PHV
Sbjct: 136 YLVMVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGILQAVPHV 195

Query: 183 IALFLIPTHFTTHIALLFIEAVWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTV 362
           IALF++PTHF THI LLF+EA+WTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYT+
Sbjct: 196 IALFIVPTHFRTHIGLLFLEAIWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTI 255

Query: 363 WMDWMFG 383
           WMDWM G
Sbjct: 256 WMDWMLG 262


>gb|AAD38120.1|AF105034_1 delta7 sterol C-5 desaturase [Arabidopsis thaliana]
          Length = 281

 Score =  272 bits (695), Expect = 2e-71
 Identities = 114/127 (89%), Positives = 124/127 (97%)
 Frame = +3

Query: 3   YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGVLQAMPHV 182
           YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHP+DG+LQA+PHV
Sbjct: 135 YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPVDGILQAVPHV 194

Query: 183 IALFLIPTHFTTHIALLFIEAVWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTV 362
           IALF++P HFTTHI LLF+EA+WTANIHDCIHG +WPVMGAGYHTIHHTTY+HNYGHYT+
Sbjct: 195 IALFIVPIHFTTHIGLLFMEAIWTANIHDCIHGNIWPVMGAGYHTIHHTTYKHNYGHYTI 254

Query: 363 WMDWMFG 383
           WMDWMFG
Sbjct: 255 WMDWMFG 261


>gb|ABA01481.1| sterol-C5-desaturase DWF7 [Gossypium hirsutum]
          Length = 144

 Score =  272 bits (695), Expect = 2e-71
 Identities = 116/127 (91%), Positives = 124/127 (97%)
 Frame = +3

Query: 3   YLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGVLQAMPHV 182
           YLVFVEFGIYWM RELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHP+DG+LQA+PHV
Sbjct: 4   YLVFVEFGIYWMLRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPVDGILQAVPHV 63

Query: 183 IALFLIPTHFTTHIALLFIEAVWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTV 362
           IALF+IPTHFTTH+ LLF+EA+WTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYT+
Sbjct: 64  IALFIIPTHFTTHVGLLFLEAIWTANIHDCIHGKLWPVMGAGYHTIHHTTYRHNYGHYTI 123

Query: 363 WMDWMFG 383
           WMDWM G
Sbjct: 124 WMDWMLG 130


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