BLASTX nr result

ID: Coptis21_contig00030301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030301
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323802.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_004142788.1| PREDICTED: uncharacterized protein LOC101221...   174   5e-42
ref|XP_002273651.1| PREDICTED: uncharacterized protein LOC100262...   173   1e-41
ref|XP_002298542.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|NP_001235995.1| uncharacterized protein LOC100305736 [Glycin...   160   1e-37

>ref|XP_002323802.1| predicted protein [Populus trichocarpa] gi|222866804|gb|EEF03935.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/114 (76%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
 Frame = -2

Query: 408 MAMASTNLAATFHKRTQGLQVMCRKKESQED---PYKVIVITPPPKNLGIRCFPPNMQCG 238
           M MAS N+ A  +++T  L V CRKKE   D   PYKVI +TPPPKNLGIRCFPPN+QCG
Sbjct: 1   MTMASWNVGA--YQKTPALDVTCRKKERDRDRSYPYKVIEVTPPPKNLGIRCFPPNLQCG 58

Query: 237 ENVTIEGQTYTVSSVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLEQS 76
           E+VTIEGQ YT+SSVTHRYQLR+GKYEPSEKRLDVLSTGRYILNLYLE+LLEQS
Sbjct: 59  ESVTIEGQAYTISSVTHRYQLRRGKYEPSEKRLDVLSTGRYILNLYLENLLEQS 112


>ref|XP_004142788.1| PREDICTED: uncharacterized protein LOC101221627 [Cucumis sativus]
           gi|449522638|ref|XP_004168333.1| PREDICTED:
           uncharacterized LOC101221627 [Cucumis sativus]
          Length = 115

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/115 (76%), Positives = 98/115 (85%), Gaps = 4/115 (3%)
 Frame = -2

Query: 408 MAMASTNLAATFHKRTQG-LQVMCRKKESQE---DPYKVIVITPPPKNLGIRCFPPNMQC 241
           MAMAS NL      +TQG  Q+ CR+KE +    DPYKVI ITPPPKNLGIRCFPPN+QC
Sbjct: 1   MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQC 60

Query: 240 GENVTIEGQTYTVSSVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLEQS 76
           GE+VTIEGQTYT+S+VT RYQLRKGKYEPSEKRLDVLSTGRYILNLYLE+LLE+S
Sbjct: 61  GESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLEKS 115


>ref|XP_002273651.1| PREDICTED: uncharacterized protein LOC100262706 [Vitis vinifera]
           gi|296087605|emb|CBI34861.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/113 (76%), Positives = 101/113 (89%), Gaps = 2/113 (1%)
 Frame = -2

Query: 408 MAMASTNLAATFHKRTQGLQVMCRKKESQED--PYKVIVITPPPKNLGIRCFPPNMQCGE 235
           MAMAS NL A  +++++GLQ+ CRKK+ + D  PYKVI ITPPPKNLG+RCFP N+QCGE
Sbjct: 1   MAMAS-NLPA--YQKSRGLQIFCRKKDRERDHHPYKVIEITPPPKNLGVRCFPSNLQCGE 57

Query: 234 NVTIEGQTYTVSSVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLEQS 76
           +VTIEGQ YT+S+VTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLE+LL+QS
Sbjct: 58  SVTIEGQAYTISAVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLQQS 110


>ref|XP_002298542.1| predicted protein [Populus trichocarpa] gi|222845800|gb|EEE83347.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/96 (82%), Positives = 85/96 (88%), Gaps = 3/96 (3%)
 Frame = -2

Query: 354 LQVMCRKKESQED---PYKVIVITPPPKNLGIRCFPPNMQCGENVTIEGQTYTVSSVTHR 184
           + V CRKKE   D   PYKVI ITPPPKNLGIRCFP N+QCGE+VTIEGQ YT+S+VTHR
Sbjct: 1   VHVTCRKKERDRDHSYPYKVIEITPPPKNLGIRCFPTNLQCGESVTIEGQAYTISAVTHR 60

Query: 183 YQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLEQS 76
           YQLRKGKYEPSEKRLDVLSTGRYILNLYLE+LLEQS
Sbjct: 61  YQLRKGKYEPSEKRLDVLSTGRYILNLYLENLLEQS 96


>ref|NP_001235995.1| uncharacterized protein LOC100305736 [Glycine max]
           gi|255626475|gb|ACU13582.1| unknown [Glycine max]
          Length = 115

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/115 (65%), Positives = 91/115 (79%), Gaps = 6/115 (5%)
 Frame = -2

Query: 402 MASTNLAATFHKRTQGLQVMCRKKESQED------PYKVIVITPPPKNLGIRCFPPNMQC 241
           MAS  +     ++T   +V C +K  ++       PYKV+ ITPPPK+LG+RC PPN+QC
Sbjct: 1   MASWKMGFASFQKTMSFEVSCNRKRDRDRERGSILPYKVVEITPPPKSLGVRCLPPNLQC 60

Query: 240 GENVTIEGQTYTVSSVTHRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLEQS 76
           GENVTIEGQ YT+S+VTHRYQLRKGKYEPSEKRLDVLSTGRY++NLYLE+LLEQS
Sbjct: 61  GENVTIEGQAYTISAVTHRYQLRKGKYEPSEKRLDVLSTGRYLVNLYLENLLEQS 115


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