BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030293
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    56   3e-06
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            55   5e-06

>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 338  LSKKKKQKRWSSMVWERWVLPRHSFTTWQLFSNSIPTQERLVQKNIIHQSSCCLCN-NVI 162
            L  ++  KRW+  VW +  +P+H+F  W    N +PT++RLV   ++  + CCLC+ +  
Sbjct: 901  LRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTE 960

Query: 161  TVESSLITC 135
            T +  L+ C
Sbjct: 961  TRDHLLLLC 969


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 338  LSKKKKQKRWSSMVWERWVLPRHSFTTWQLFSNSIPTQERLVQKNIIHQSSCCLCN-NVI 162
            L  ++  KRW+  VW +  +P+H+F  W    N +PT++RLV   ++  + CCLC+ +  
Sbjct: 901  LRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTE 960

Query: 161  TVESSLITC 135
            T +  L+ C
Sbjct: 961  TRDHLLLLC 969