BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030279
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28199.1| unknown [Arabidopsis thaliana]                          55   6e-06
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    55   6e-06
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    55   6e-06

>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
 Frame = -3

Query: 480 TYGWLWCLEVWWLYGTTEKKIF--HEDLPSKMSSCKSFVRKQIMVTVSLSKVTCNLQDKV 307
           T+  L+ L +WW +      IF   +    ++   K   R+  M  V +  ++    ++V
Sbjct: 81  TWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERV 140

Query: 306 MLQIWGIEMKARIAPRILPCTWSLPEENVTKVNTDGAAKGNPGQAGVGVVGRDSNGAFSF 127
              I                 WS PEE   K+NTDGA++GNPG A  G V RD  GA+  
Sbjct: 141 ERLI----------------AWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRG 184

Query: 126 VYCRNIG 106
            +  NIG
Sbjct: 185 GFALNIG 191


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
 Frame = -3

Query: 480 TYGWLWCLEVWWLYGTTEKKIF--HEDLPSKMSSCKSFVRKQIMVTVSLSKVTCNLQDKV 307
           T+  L+ L +WW +      IF   +    ++   K   R+  M  V +  ++    ++V
Sbjct: 81  TWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERV 140

Query: 306 MLQIWGIEMKARIAPRILPCTWSLPEENVTKVNTDGAAKGNPGQAGVGVVGRDSNGAFSF 127
              I                 WS PEE   K+NTDGA++GNPG A  G V RD  GA+  
Sbjct: 141 ERLI----------------AWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRG 184

Query: 126 VYCRNIG 106
            +  NIG
Sbjct: 185 GFALNIG 191


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
 Frame = -3

Query: 480 TYGWLWCLEVWWLYGTTEKKIF--HEDLPSKMSSCKSFVRKQIMVTVSLSKVTCNLQDKV 307
           T+  L+ L +WW +      IF   +    ++   K   R+  M  V +  ++    ++V
Sbjct: 81  TWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERV 140

Query: 306 MLQIWGIEMKARIAPRILPCTWSLPEENVTKVNTDGAAKGNPGQAGVGVVGRDSNGAFSF 127
              I                 WS PEE   K+NTDGA++GNPG A  G V RD  GA+  
Sbjct: 141 ERLI----------------AWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRG 184

Query: 126 VYCRNIG 106
            +  NIG
Sbjct: 185 GFALNIG 191