BLASTX nr result

ID: Coptis21_contig00030277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030277
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion chann...   304   2e-80
ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion chann...   304   2e-80
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   303   3e-80
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   303   3e-80
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80

>ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 663

 Score =  304 bits (778), Expect = 2e-80
 Identities = 148/171 (86%), Positives = 154/171 (90%)
 Frame = +1

Query: 1    ITREGDPVQRMLFVVRGHLQSSQVLRDGVQSCCMLGPGNFSGDELLSWCLRRPFIERLPP 180
            ITREGDPVQRMLFVVRGHLQSSQVLRDGV+SCCMLGPGNFSGDELLSWCLRRPFIERLPP
Sbjct: 493  ITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPP 552

Query: 181  SAFTLVTLETTEAFGLEAEDLKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAVQLAW 360
            S+FTLVTLETTEAF LEAED+KYVTQHFRYTFV++KVKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 553  SSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAW 612

Query: 361  RRYRHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPELDDFAF 513
            RRYRHRLTLTSLSFI            GEDRLRLYTALLTSPKP  D F F
Sbjct: 613  RRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 663


>ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 659

 Score =  304 bits (778), Expect = 2e-80
 Identities = 148/171 (86%), Positives = 154/171 (90%)
 Frame = +1

Query: 1    ITREGDPVQRMLFVVRGHLQSSQVLRDGVQSCCMLGPGNFSGDELLSWCLRRPFIERLPP 180
            ITREGDPVQRMLFVVRGHLQSSQVLRDGV+SCCMLGPGNFSGDELLSWCLRRPFIERLPP
Sbjct: 489  ITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPP 548

Query: 181  SAFTLVTLETTEAFGLEAEDLKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAVQLAW 360
            S+FTLVTLETTEAF LEAED+KYVTQHFRYTFV++KVKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 549  SSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAW 608

Query: 361  RRYRHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPELDDFAF 513
            RRYRHRLTLTSLSFI            GEDRLRLYTALLTSPKP  D F F
Sbjct: 609  RRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 659


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  303 bits (777), Expect = 3e-80
 Identities = 147/171 (85%), Positives = 153/171 (89%)
 Frame = +1

Query: 1    ITREGDPVQRMLFVVRGHLQSSQVLRDGVQSCCMLGPGNFSGDELLSWCLRRPFIERLPP 180
            I REGDPVQRMLFVVRGHLQSSQVLRDGV+SCCMLGPGNFSGDELLSWCLRRPFIERLPP
Sbjct: 521  IAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPP 580

Query: 181  SAFTLVTLETTEAFGLEAEDLKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAVQLAW 360
            S+ TL+TLETTEAFGLEAED+KYVTQHFRYTFV EKVKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 581  SSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAW 640

Query: 361  RRYRHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPELDDFAF 513
            RRY+HRLTLTSLSFI            GEDRLRLYTALLTSPKP  DDF F
Sbjct: 641  RRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF 691


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 687

 Score =  303 bits (777), Expect = 3e-80
 Identities = 147/171 (85%), Positives = 155/171 (90%)
 Frame = +1

Query: 1    ITREGDPVQRMLFVVRGHLQSSQVLRDGVQSCCMLGPGNFSGDELLSWCLRRPFIERLPP 180
            ITREGDPVQRMLFVVRGHLQSSQVLRDGV+SCCMLGPGNFSGDELLSWCLRRPFIERLPP
Sbjct: 517  ITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPP 576

Query: 181  SAFTLVTLETTEAFGLEAEDLKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAVQLAW 360
            S+ TLVTLETTEAFGLEAED+KYVTQHFRYTFV+E+VKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 577  SSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLAW 636

Query: 361  RRYRHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPELDDFAF 513
            RRY+HRLTLTSLSFI            GEDRLRLYTALLTSPKP  +DF F
Sbjct: 637  RRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQEDFDF 687


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  303 bits (776), Expect = 4e-80
 Identities = 147/171 (85%), Positives = 154/171 (90%)
 Frame = +1

Query: 1   ITREGDPVQRMLFVVRGHLQSSQVLRDGVQSCCMLGPGNFSGDELLSWCLRRPFIERLPP 180
           ITREGDPVQRMLFVVRGHLQSSQVLRDGV+SCCMLGPGNFSGDELLSWCLRRPFIERLPP
Sbjct: 465 ITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPP 524

Query: 181 SAFTLVTLETTEAFGLEAEDLKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAVQLAW 360
           S+ TLVTLETTEAFGLEAED+KYVTQHFRYTFV E+VKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 525 SSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKERVKRSARYYSPGWRTWAAVAIQLAW 584

Query: 361 RRYRHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPELDDFAF 513
           RRY+HRLTLTSLSFI            GEDRLRLYTALLTSPKP  +DF F
Sbjct: 585 RRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQEDFDF 635


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