BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030250
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
emb|CBI22109.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...    87   1e-15

>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/87 (57%), Positives = 59/87 (67%)
 Frame = +3

Query: 3   DFVPLLKFVGEVSEMKCLKSTXXXXXXXXAFAESKQIDKAIMIFDLMKGLNCKPDRVTYN 182
           D V LL+ V EVSE+    ST        AFAE  Q DKAI+IF+ M+ L CKPD VTYN
Sbjct: 178 DDVQLLRLVKEVSELTFPSSTKVVNRFIFAFAECGQFDKAILIFEQMENLKCKPDLVTYN 237

Query: 183 IVMDMLGRAGWIDEMLHAFASMKESSL 263
            V+D+LGRAG IDEML  FASMKE+ +
Sbjct: 238 TVLDLLGRAGRIDEMLGEFASMKEAGI 264


>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = +3

Query: 15  LLKFVGEVSEMKCLKSTXXXXXXXXAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 194
           LLKFV EVSE+   ++         AFAE +QI+K+++IFD MK L CKPD +TYN V+ 
Sbjct: 186 LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLG 245

Query: 195 MLGRAGWIDEMLHAFASMKESSL 263
            LGRAG +DEMLH F+SMK +++
Sbjct: 246 FLGRAGRLDEMLHEFSSMKVANI 268


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = +3

Query: 15  LLKFVGEVSEMKCLKSTXXXXXXXXAFAESKQIDKAIMIFDLMKGLNCKPDRVTYNIVMD 194
           LLKFV EVSE+   ++         AFAE +QI+K+++IFD MK L CKPD +TYN V+ 
Sbjct: 157 LLKFVREVSELTFPRNATILNRIIHAFAECRQIEKSLIIFDHMKSLKCKPDLITYNTVLG 216

Query: 195 MLGRAGWIDEMLHAFASMKESSL 263
            LGRAG +DEMLH F+SMK +++
Sbjct: 217 FLGRAGRLDEMLHEFSSMKVANI 239


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/87 (55%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   DFVPLLKFVGEVSEMKCLKSTXXXXXXXXAFAESKQIDKAIMIFDLMKGLNCKPDRVTYN 182
           D V LL+ V EVSEM    S         AFAE  Q DKA++IF  M+ L CKPD VTYN
Sbjct: 148 DDVQLLRLVKEVSEMTFPSSMMVVNRIIFAFAECGQFDKALLIFKQMENLKCKPDLVTYN 207

Query: 183 IVMDMLGRAGWIDEMLHAFASMKESSL 263
            V+D+LG AG IDEML  FASMKE+ +
Sbjct: 208 TVLDLLGHAGRIDEMLCEFASMKEAGI 234


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/87 (50%), Positives = 60/87 (68%)
 Frame = +3

Query: 3   DFVPLLKFVGEVSEMKCLKSTXXXXXXXXAFAESKQIDKAIMIFDLMKGLNCKPDRVTYN 182
           D V L+KFV EV E+   +S         AFAE +Q DKA++IFD +K L  KPD +TYN
Sbjct: 201 DHVLLMKFVKEVLELAFPRSMVVINRIIFAFAECRQFDKALLIFDQIKDLEYKPDLITYN 260

Query: 183 IVMDMLGRAGWIDEMLHAFASMKESSL 263
           +V+ +LGRAG +DEML+ F+SMKE+ +
Sbjct: 261 MVLHILGRAGRVDEMLYEFSSMKEAGI 287