BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030237
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   210   1e-52
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   210   1e-52
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   208   3e-52
ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat...   204   8e-51
ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46

>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  210 bits (534), Expect = 1e-52
 Identities = 101/159 (63%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3    PDAITFSALLSACRHAGLVELGDKFFASMKQDYGILPEIDHYSCMVDLYGRTNCLDKAVE 182
            PDAITF ALLSACRH GLVELG+ FF SM  DY I PEIDHY+CM+DLYGR N LDKA+E
Sbjct: 911  PDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALE 970

Query: 183  LMKEIPVKRDAVIWGTFLNACMTNESMXXXXXXXXXXXXXXXDNGARYVQLANVYAAEGN 362
             M++IP++ DAVIWG FLNAC  N +                +NG+RYVQLANVYAAEGN
Sbjct: 971  FMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGN 1030

Query: 363  WREMSRIRGKMRG-EVRKLAGCSWVYIENTKNIFTSGDR 476
            W EM RIR KM+G EV+K AGCSWV++E+  ++F SGDR
Sbjct: 1031 WEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDR 1069


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score =  210 bits (534), Expect = 1e-52
 Identities = 101/159 (63%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3    PDAITFSALLSACRHAGLVELGDKFFASMKQDYGILPEIDHYSCMVDLYGRTNCLDKAVE 182
            PDAITF ALLSACRH GLVELG+ FF SM  DY I PEIDHY+CM+DLYGR N LDKA+E
Sbjct: 911  PDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALE 970

Query: 183  LMKEIPVKRDAVIWGTFLNACMTNESMXXXXXXXXXXXXXXXDNGARYVQLANVYAAEGN 362
             M++IP++ DAVIWG FLNAC  N +                +NG+RYVQLANVYAAEGN
Sbjct: 971  FMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGN 1030

Query: 363  WREMSRIRGKMRG-EVRKLAGCSWVYIENTKNIFTSGDR 476
            W EM RIR KM+G EV+K AGCSWV++E+  ++F SGDR
Sbjct: 1031 WEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDR 1069


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  208 bits (530), Expect = 3e-52
 Identities = 105/160 (65%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   PDAITFSALLSACRHAGLVELGDKFFASMKQDYGILPEIDHYSCMVDLYGRTNCLDKAVE 182
           PDA+TF ALLSACRH GLVELG+K+FASM  DY ILPEIDHY+CM+DLYGR N L+KAV 
Sbjct: 489 PDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYACMIDLYGRANQLEKAVA 547

Query: 183 LMKEIPVKRDAVIWGTFLNACMTNESMXXXXXXXXXXXXXXXDNGARYVQLANVYAAEGN 362
            MK IP++ DAVI G FLNAC  N +                DNGARYVQLANVYAAEG 
Sbjct: 548 FMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGK 607

Query: 363 WREMSRIRGKMR-GEVRKLAGCSWVYIENTKNIFTSGDRS 479
           W EM RIR KMR  E++K AGCSWVY+EN  +IFTSGD S
Sbjct: 608 WVEMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSS 647


>ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 681

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/160 (61%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   PDAITFSALLSACRHAGLVELGDKFFASMKQDYGILPEIDHYSCMVDLYGRTNCLDKAVE 182
           PDA+TF ALLSACRH GLVELG++FF SM+  Y +LPEI HY+CMVD+YGR N L+KAVE
Sbjct: 486 PDAVTFVALLSACRHRGLVELGEQFFMSMEH-YNVLPEIYHYACMVDMYGRANQLEKAVE 544

Query: 183 LMKEIPVKRDAVIWGTFLNACMTNESMXXXXXXXXXXXXXXXDNGARYVQLANVYAAEGN 362
            M++IP+K DA IWG FLNAC  +                  DNG+RYVQLAN YAA+G 
Sbjct: 545 FMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANAYAAKGK 604

Query: 363 WREMSRIRGKMRG-EVRKLAGCSWVYIENTKNIFTSGDRS 479
           W EM RIR KMRG E +KLAGCSW+Y+EN  ++FTSGDRS
Sbjct: 605 WDEMGRIRKKMRGHEAKKLAGCSWIYVENGIHVFTSGDRS 644


>ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/161 (58%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3   PDAITFSALLSACRHAGLVELGDKFFASMKQDYGILPEIDHYSCMVDLYGRTNCLDKAVE 182
           PDA+TF ALLSACRH GLV+LG+K F SM +DY ILPE DHY+CM+DLYGR + L+K V 
Sbjct: 491 PDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQLEKMVL 550

Query: 183 LMKEIPVK-RDAVIWGTFLNACMTNESMXXXXXXXXXXXXXXXDNGARYVQLANVYAAEG 359
            M+ IP++ +DA + G F NAC  N +                D+GARYVQLANVYAAEG
Sbjct: 551 FMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYVQLANVYAAEG 610

Query: 360 NWREMSRIRGKMRG-EVRKLAGCSWVYIENTKNIFTSGDRS 479
           NW EM RIR +MRG E +K AGCSWVY++N  + FTSGDR+
Sbjct: 611 NWAEMGRIRREMRGKEAKKFAGCSWVYLDNEVHSFTSGDRT 651