BLASTX nr result

ID: Coptis21_contig00030236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030236
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37643.3| unnamed protein product [Vitis vinifera]               85   3e-25
ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262...    85   3e-25
ref|XP_003537684.1| PREDICTED: uncharacterized protein LOC100782...    77   4e-23
ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|2...    82   9e-23
ref|XP_002521721.1| conserved hypothetical protein [Ricinus comm...    81   2e-22

>emb|CBI37643.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score = 84.7 bits (208), Expect(2) = 3e-25
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = +2

Query: 2   GRLCTYDDSVIEKYLMQSQSRLDPSLPKQVIVKLPFADSSITIVKFVTDGSKFISGMDED 181
           G +  YDD VIEKYL+Q QSR  PSLPK+++VKLPF+DSSITI KF+T+   F++  DED
Sbjct: 378 GCMYAYDDYVIEKYLLQCQSRSSPSLPKEIMVKLPFSDSSITIAKFITENPNFLNSSDED 437

Query: 182 YMT 190
           Y++
Sbjct: 438 YVS 440



 Score = 55.5 bits (132), Expect(2) = 3e-25
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +1

Query: 184 YDLLVKNFSALLPSKSRAKDGNQLNLARFSRSAKITNFYITGHSDGTITFWD 339
           Y  L K+    LPS+++ KD  +LN   F   AKI N YITGHS+G I FWD
Sbjct: 438 YVSLAKSIPPFLPSEAKPKDETRLNSTNFGGFAKIKNLYITGHSNGAIYFWD 489


>ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262676 [Vitis vinifera]
          Length = 1053

 Score = 84.7 bits (208), Expect(2) = 3e-25
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = +2

Query: 2   GRLCTYDDSVIEKYLMQSQSRLDPSLPKQVIVKLPFADSSITIVKFVTDGSKFISGMDED 181
           G +  YDD VIEKYL+Q QSR  PSLPK+++VKLPF+DSSITI KF+T+   F++  DED
Sbjct: 377 GCMYAYDDYVIEKYLLQCQSRSSPSLPKEIMVKLPFSDSSITIAKFITENPNFLNSSDED 436

Query: 182 YMT 190
           Y++
Sbjct: 437 YVS 439



 Score = 55.5 bits (132), Expect(2) = 3e-25
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +1

Query: 184 YDLLVKNFSALLPSKSRAKDGNQLNLARFSRSAKITNFYITGHSDGTITFWD 339
           Y  L K+    LPS+++ KD  +LN   F   AKI N YITGHS+G I FWD
Sbjct: 437 YVSLAKSIPPFLPSEAKPKDETRLNSTNFGGFAKIKNLYITGHSNGAIYFWD 488


>ref|XP_003537684.1| PREDICTED: uncharacterized protein LOC100782049 [Glycine max]
          Length = 961

 Score = 77.4 bits (189), Expect(2) = 4e-23
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +2

Query: 2   GRLCTYDDSVIEKYLMQSQSRLDPSLPKQVIVKLPFADSSITIVKFVTDGSKFISGMDED 181
           G +  YDD++IE+YL+QSQS+  PSLPK+V+VKLP ADS+IT  KF+++ S F S  DE 
Sbjct: 372 GHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSNFFSSEDEY 431

Query: 182 Y 184
           Y
Sbjct: 432 Y 432



 Score = 55.5 bits (132), Expect(2) = 4e-23
 Identities = 24/52 (46%), Positives = 34/52 (65%)
 Frame = +1

Query: 184 YDLLVKNFSALLPSKSRAKDGNQLNLARFSRSAKITNFYITGHSDGTITFWD 339
           Y+ LVKN+  L+P ++  KDG   + + F+  + I N YITGHS+G I FWD
Sbjct: 432 YNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWD 483


>ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|222856664|gb|EEE94211.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score = 82.0 bits (201), Expect(2) = 9e-23
 Identities = 36/62 (58%), Positives = 50/62 (80%)
 Frame = +2

Query: 2   GRLCTYDDSVIEKYLMQSQSRLDPSLPKQVIVKLPFADSSITIVKFVTDGSKFISGMDED 181
           G +  YDD +IEKYL+QSQS++ PSLPK+V+VK+PFADSSIT+ KF+T+    ++  DED
Sbjct: 268 GHIYVYDDCLIEKYLLQSQSKISPSLPKEVMVKMPFADSSITVAKFITNTPNLLTYGDED 327

Query: 182 YM 187
           Y+
Sbjct: 328 YI 329



 Score = 49.7 bits (117), Expect(2) = 9e-23
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = +1

Query: 169 YG*GLYDLLVKNFSALLPSKSRAKDGNQLNLARFSRSAKITNFYITGHSDGTITFWD 339
           YG   Y  L KN  +  P + R KDG   +  +F+   K+ N YITGHSDG I FWD
Sbjct: 323 YGDEDYIRLAKNIPSPFPFEPRPKDGT--HSFQFNGFTKVKNLYITGHSDGAINFWD 377


>ref|XP_002521721.1| conserved hypothetical protein [Ricinus communis]
           gi|223539112|gb|EEF40708.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 995

 Score = 80.9 bits (198), Expect(2) = 2e-22
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = +2

Query: 2   GRLCTYDDSVIEKYLMQSQSRLDPSLPKQVIVKLPFADSSITIVKFVTDGSKFISGMDED 181
           G +  +DD  IEKYL+QSQSR  PSLPK+V++KLP+ADSSITI KF+TD S  +S  DED
Sbjct: 384 GHIYVWDDCQIEKYLLQSQSRGSPSLPKEVMMKLPYADSSITIAKFITDISPMLSFGDED 443

Query: 182 YM 187
           Y+
Sbjct: 444 YL 445



 Score = 49.7 bits (117), Expect(2) = 2e-22
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +1

Query: 184 YDLLVKNFSALLPSKSRAKDGNQLNLARFSRSAKITNFYITGHSDGTITFWD 339
           Y L  ++  +L P + + K G  +N   FS  +KI N YI+GHSDG I FWD
Sbjct: 444 YLLFSQSVPSLFPFEVKPKHGTYMNPVPFSGFSKIKNLYISGHSDGAINFWD 495