BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030228
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat...   217   9e-55
ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [C...   214   8e-54
gb|AFK36805.1| unknown [Lotus japonicus]                              211   4e-53
emb|CBI25023.3| unnamed protein product [Vitis vinifera]              211   5e-53
ref|XP_003535803.1| PREDICTED: 40S ribosomal protein S17-4-like ...   210   9e-53

>ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]
           gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  217 bits (552), Expect = 9e-55
 Identities = 110/139 (79%), Positives = 122/139 (87%), Gaps = 8/139 (5%)
 Frame = +2

Query: 62  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKR 241
           MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 242 IQRGPVRGISLKLQEEERERRMDYVPDESAIDVDHIKVDKDTLDMLASLGFNDLPGVQVG 421
           IQ+GPVRGISLKLQEEERERRMD+VPDESAI  DHI+VDK+TL+MLASLG ++LPGV   
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETLEMLASLGMSELPGVVKV 120

Query: 422 D--------GMGFGRGRRY 454
           D          G GRGRRY
Sbjct: 121 DPAAAAPVAAFGLGRGRRY 139


>ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [Cucumis sativus]
           gi|449515869|ref|XP_004164970.1| PREDICTED: 40S
           ribosomal protein S17-like [Cucumis sativus]
          Length = 139

 Score =  214 bits (544), Expect = 8e-54
 Identities = 109/140 (77%), Positives = 124/140 (88%), Gaps = 9/140 (6%)
 Frame = +2

Query: 62  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKR 241
           MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSRMTIDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 242 IQRGPVRGISLKLQEEERERRMDYVPDESAIDVDHIKVDKDTLDMLASLGFNDLPGV--- 412
           IQ+GPVRGISLKLQEEERERRMD+VPD SAI  + I+VDK+TLDML++LG ND+PG+   
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSALGMNDIPGLVQV 120

Query: 413 ------QVGDGMGFGRGRRY 454
                 QVG G+G GRGRRY
Sbjct: 121 DPTVPQQVGFGLG-GRGRRY 139


>gb|AFK36805.1| unknown [Lotus japonicus]
          Length = 144

 Score =  211 bits (538), Expect = 4e-53
 Identities = 110/144 (76%), Positives = 122/144 (84%), Gaps = 13/144 (9%)
 Frame = +2

Query: 62  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKR 241
           MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKK+++EV++IPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKR 60

Query: 242 IQRGPVRGISLKLQEEERERRMDYVPDESAIDVDHIKVDKDTLDMLASLGFNDLPG-VQV 418
           IQ+GPVRGISLKLQEEERERRMD+VPDESAI  DHI VDK+TL+MLA+LG  ++PG VQV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDHIAVDKETLEMLAALGMAEIPGVVQV 120

Query: 419 ------------GDGMGFGRGRRY 454
                       G G G G GRRY
Sbjct: 121 DPVAVQQIPFTRGGGAGGGAGRRY 144


>emb|CBI25023.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  211 bits (537), Expect = 5e-53
 Identities = 108/140 (77%), Positives = 123/140 (87%), Gaps = 6/140 (4%)
 Frame = +2

Query: 44  ASSAATMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFS 223
           +S+++ MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKK+++EV+IIPSKRLRNKIAGFS
Sbjct: 21  SSNSSDMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFS 80

Query: 224 THLMKRIQRGPVRGISLKLQEEERERRMDYVPDESAIDVDHIKVDKDTLDMLASLGFNDL 403
           THLMKRIQ+GPVRGISLKLQEEERERRMD+VPDESAI  D IKVDK+T+DML++LG  +L
Sbjct: 81  THLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETIDMLSALGMAEL 140

Query: 404 PGV------QVGDGMGFGRG 445
           PGV       V   M FGRG
Sbjct: 141 PGVVETEPEVVAPAMVFGRG 160


>ref|XP_003535803.1| PREDICTED: 40S ribosomal protein S17-4-like [Glycine max]
          Length = 139

 Score =  210 bits (535), Expect = 9e-53
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 8/139 (5%)
 Frame = +2

Query: 62  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKR 241
           MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKV++EV+IIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 242 IQRGPVRGISLKLQEEERERRMDYVPDESAIDVDHIKVDKDTLDMLASLGFNDLPG---- 409
           IQ+GPVRGISLKLQEEERERRMD+VPD SAI  D I+VDK+TLDMLA+LG +++PG    
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDQIEVDKETLDMLAALGMSEVPGVVQV 120

Query: 410 ----VQVGDGMGFGRGRRY 454
               VQ   G G G GRRY
Sbjct: 121 DPVAVQAPLGFGRGAGRRY 139