BLASTX nr result

ID: Coptis21_contig00030216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030216
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272440.2| PREDICTED: auxin-induced protein 5NG4-like [...    72   6e-11
emb|CBI27639.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002272105.1| PREDICTED: auxin-induced protein 5NG4-like [...    72   6e-11
ref|XP_002515123.1| Auxin-induced protein 5NG4, putative [Ricinu...    72   6e-11
ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_002272440.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 362

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = +1

Query: 1   LTHPSHSRATSNSTFHANVSDSHEKTHRWIIGSIALFAGAAFWSSWYLIQAKISKTFPCQ 180
           LT+P++ +A    T HA  S S  +T  W  GS+ L A +  WSSW+L+QA ISK +PCQ
Sbjct: 157 LTNPAYPQAEIPGTSHAKTSISSHRTKSWATGSMVLTAASLTWSSWFLLQAGISKKYPCQ 216

Query: 181 YTSTAI 198
           Y+STAI
Sbjct: 217 YSSTAI 222


>emb|CBI27639.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = +1

Query: 1   LTHPSHSRATSNSTFHANVSDSHEKTHRWIIGSIALFAGAAFWSSWYLIQAKISKTFPCQ 180
           LT+P++ +A    T HA  S S  +T  W  GS+ L A +  WSSW+L+QA ISK +PCQ
Sbjct: 157 LTNPAYPQAEIPGTSHAKTSISSHRTKSWATGSMVLTAASLTWSSWFLLQAGISKKYPCQ 216

Query: 181 YTSTAI 198
           Y+STAI
Sbjct: 217 YSSTAI 222


>ref|XP_002272105.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 350

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = +1

Query: 1   LTHPSHSRATSNSTFHANVSDSHEKTHRWIIGSIALFAGAAFWSSWYLIQAKISKTFPCQ 180
           LT+P++ +A    T HA  S S  +T  W  GS+ L A +  WSSW+L+QA ISK +PCQ
Sbjct: 145 LTNPAYPQAEIPGTSHAKTSISSHRTKSWATGSMVLTAASLTWSSWFLLQAGISKKYPCQ 204

Query: 181 YTSTAI 198
           Y+STAI
Sbjct: 205 YSSTAI 210


>ref|XP_002515123.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223545603|gb|EEF47107.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 402

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   LTHPSHSRATSNSTFHANVSDSHEKTHR-WIIGSIALFAGAAFWSSWYLIQAKISKTFPC 177
           LTHP HS    N   H     + +K HR W++GSI L AG   WSSW+LIQAKI KT+PC
Sbjct: 196 LTHP-HSGDLKN---HVAAMMTEKKRHRSWVLGSIFLMAGCVAWSSWFLIQAKIGKTYPC 251

Query: 178 QYTSTAI 198
           +Y+STAI
Sbjct: 252 KYSSTAI 258


>ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|222844413|gb|EEE81960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13  SHSRA-TSNSTFHANVSDSHEKTHRWIIGSIALFAGAAFWSSWYLIQAKISKTFPCQYTS 189
           SHSRA T++   HA+   S +K  RW++GSI   AG   WS W+LIQAKISK++P QY+S
Sbjct: 160 SHSRAATTDILNHADTMISGKKRQRWVVGSILSLAGCFTWSLWFLIQAKISKSYPFQYSS 219

Query: 190 TAI 198
           TA+
Sbjct: 220 TAL 222


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