BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030211
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594788.1| F-box/kelch-repeat protein [Medicago truncat...    66   3e-09
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_003593988.1| F-box/kelch-repeat protein [Medicago truncat...    55   8e-06

>ref|XP_003594788.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483836|gb|AES65039.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/82 (46%), Positives = 45/82 (54%)
 Frame = +2

Query: 68  IEKKNKPCKSMNENYLVGCDGELFSVYVGPKGKWVDVRKWDYSKSKWMVVHSLKDKMLFV 247
           IE    P      N+L+ CDG L +V     GK V V K D S   WM V SLK+ MLFV
Sbjct: 230 IEGPQAPYNKHFNNFLLECDGNLLAVLESSFGKGVKVFKLDESTMTWMKVESLKNHMLFV 289

Query: 248 SRSTCVSLKATKEGMQNKIYFP 313
            ++ C S  A   GM+NKIYFP
Sbjct: 290 GKA-CFSTVANIPGMENKIYFP 310


>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = +2

Query: 86  PCKSMNENYLVGCDGELFSVYVGPKGKWVDVRKWDYSKSKWMVVHSLKDKMLFVSRSTCV 265
           P    ++N+LV CDG L SV+VG     V+V +   SK  W+ V +L + M+ VSRS+  
Sbjct: 569 PRSHCHQNFLVECDGNLLSVFVGEFEGSVEVFRLSQSKMVWIRVENLGNYMVCVSRSSSF 628

Query: 266 SLKATKEGMQNKIYFPITFHDKN 334
           S  A   GM+NKI+FP  F+ +N
Sbjct: 629 SSLAKAPGMENKIFFP-RFYGEN 650


>ref|XP_003593988.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483036|gb|AES64239.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 387

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +2

Query: 17  GRSDWTILGEPQPYKSIIEKKNKPCKSMNENYLVGCDGELFSVYVGPKGK-WVDVRKWDY 193
           G   W +L EPQ           PC S   N+LV CDG L +V+    GK  V V K D 
Sbjct: 261 GEISWKVLEEPQA----------PCSSCFNNFLVECDGNLLAVFEISLGKEGVRVFKLDE 310

Query: 194 SKSKWMVVHSLKDKMLFVSRST 259
           S   WM + SLK+ MLFV +++
Sbjct: 311 STMTWMKIESLKNHMLFVGKTS 332